Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30259g00021 ATGGGAAATATTGGTAATGTTATAAATGGGCTTAAGCCTGCATTTGGGATGATAATTGTTCAAGTTGCTTATGCTGGTCTAAGTATATTATACAAATTGGTTGTGGAAGATGGTATGAGTATGAGTGTTCTCATTGCCTATAGAACCCTAATTGCCACATCTTTTGTTGTTCCTCTTGCATTCTTCATGGAAAGGAAGACCAAGCCAAAAATTACACCAGAAGTACTCCTTCAATCATTCTTTTGTGGATTATTTGGGGTAACTTTACAACAAAATCTATATGTGGGAGCAGTGGCTTTTGCATCAGCAACATATGCTACAGCCATGACCAACCTTATTCCTGGTGTTACGTTCATCCTAGCCCTCTGTTTTGGATTAGAAAGGTTGAAGATTAGAACATTAACAGGGAAGGCTAAGGTTGTTGGCACTGTAATGGGAATTGGTGGAGTCATGATCATCACATTCTATAAGACCAGAGAGATTCACATTTGGCCAACACATCATCTCAATTTCAAGAACAACAATGACCAATCACACATTTCTCCTACTAATCAATTTTTGGGTTCTGCTTTTGGTTTTGGAAATTGTTTATGCTATTCAATGTGGTTGATCATTCAGGGTAGGATGAGTGAAAAATTCCCCTGGCAATATTCAAGTGCAGCATTGGTGTCAGGGATGGCATGTATTCAAGTAATTATATTTGCTCTTTGCATGGAAAGAAATTGGAATCAATGGAGGATTGGATGGAACATCAAACTCCTCACTATAATTTATACGGGAATAGTGCCATCTGGAATAGCTTTGGTTCTGATTTCATGGTGTGTGAGATTAAGAGGACCACTTTATGCTTCAACTTTCAACCCTCTTTCTCTTGTCATAGTTACAATTGCTGCCTCTTTAATTTTGGATGAAAGGCTCTTTGTAGGAAGGGAATACCATCTCCCCTTATTGAAGACGTTTCTCTTCCCGTGA 972 0.3848 MGNIGNVINGLKPAFGMIIVQVAYAGLSILYKLVVEDGMSMSVLIAYRTLIATSFVVPLAFFMERKTKPKITPEVLLQSFFCGLFGVTLQQNLYVGAVAFASATYATAMTNLIPGVTFILALCFGLERLKIRTLTGKAKVVGTVMGIGGVMIITFYKTREIHIWPTHHLNFKNNNDQSHISPTNQFLGSAFGFGNCLCYSMWLIIQGRMSEKFPWQYSSAALVSGMACIQVIIFALCMERNWNQWRIGWNIKLLTIIYTGIVPSGIALVLISWCVRLRGPLYASTFNPLSLVIVTIAASLILDERLFVGREYHLPLLKTFLFP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30259g00021 323 Pfam EamA-like transporter family 188 307 IPR000620 GO:0016020
Stsc30259g00021 323 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Stsc30259g00021 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Stsc30259g00021 323 PANTHER WAT1-RELATED PROTEIN 13 307 IPR030184 GO:0016020|GO:0022857
Stsc30259g00021 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30259g00021 Stsc-Chr30259 119594 123519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30259g00021 1 309 Nodulin-like Gene Family AT1G68170 39.423 2.26e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30259g00021 - - aprc:113856022 390.963