Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30259g00017 ATGATTCGAAATGGTTGCGTTGCATCCCCACAAGTGTGTGTTCCTTTGAATTCGCGGCCATGGAAAGGTGTCATGCCCTGTAGCTCTTTCTTATGCTGTACTTCTCAGTTTCCTGCTAAGGTTGCTGTTTCCAACATTCGGAGCTCTTCCTCATTTGGACATAGTTTTGAGTGTAAATCCTCATCGCGGAGAGGATTGACATTCTCAAACATGTCTGTTGCGTCGAGCCTCCTTTCAAGCAGGGTTCAAAATCCTCTGTTTCATACAATACCTGTGTTACCGAAGCAGTGTGGGTCTACTACAACTGTTCGGGCTTCGAAGGATGTCCCAACTAGCTGGCGTTATCCACAGATGACCAAGAAACCAAGATGGTGGTGGAGGTCATTAGCGTGCCTCCCTTACCTCATGCCTCTCCACGAGACATGGATGTACGCCGAGACAGCATACAATCTTCACCCCTTTCTGGAATACTTTGAGTTCATGACATACCCTTTTTTGGAGGCTATTGGGATGCTGCCTAGCTGGTTTCTCATGGCATATTTCTTCATCGCCTACCTAGGAATCGTGAGGAGAAAAGAATGGCCTCACTTCTTCAGATTTCATGTTGTAATGGGAATGCTGTTGGAGATTGCACTGCAGGTTATAGGGACTGTGAGTCGCTGGATGCCGCTATCGGTCTACTGGGGTAAACTTGGAATGCATTTCTGGACTGGTGTATCATTCGCTTATCTCTTCACTGTCTTGGAGTCGATAAGGTGCGCTCTCGCTGGTATGTATGCCGATATCCCCTTTATATGCGATGCAGCATATATCCAAATACCATATGACTAA 831 0.4657 MIRNGCVASPQVCVPLNSRPWKGVMPCSSFLCCTSQFPAKVAVSNIRSSSSFGHSFECKSSSRRGLTFSNMSVASSLLSSRVQNPLFHTIPVLPKQCGSTTTVRASKDVPTSWRYPQMTKKPRWWWRSLACLPYLMPLHETWMYAETAYNLHPFLEYFEFMTYPFLEAIGMLPSWFLMAYFFIAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSVYWGKLGMHFWTGVSFAYLFTVLESIRCALAGMYADIPFICDAAYIQIPYD 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30259g00017 276 Pfam Chloroplast import apparatus Tic20-like 99 269 IPR005691 -
Stsc30259g00017 276 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 33 276 IPR005691 -
Stsc30259g00017 276 NCBIfam Tic20 family chloroplast protein importer 1 276 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30259g00017 Stsc-Chr30259 106388 108625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30259g00017 61 276 Chloroplast and Mitochondria Gene Families AT4G03320 38.356 6.15e-47 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30259g00017 - - adu:107464071 551.977