Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30259g00015 ATGGGCGTGAACTCAACCACCACCCTCAAAATCCAATCGGAATTCCCGATCTCCATGCCAACTCCGCCCTTGGAGATCCACAACGTGCGGTTGCCGCCGCAGCGAAGCACCGCACAGAAGCTAAGGCAGAGACTCTCAGACATATTCTTCCCGGATGATCCACTTCACCGGTTCAAGAACCAACCGTCGTGGCTCGTCAAACTCATGCTCGGTGTTCAGTGCTTGTTCCCTATCTTCCAGTGGGGCCCAACCTATAATCTCTCCCTTCTTCGCTCCGACGTCATCTCCGGCCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCAAACCTGCCACCTATTATTGGATTATATTCAAGTTTTGTGCCCCCATTGATATATTCTCTGCTTGGAAGCTCTAAACATCTTGGCGTAGGTCCAGTTTCAATTGCATCTTTGGTAATGGGATCAATGTTGAGTGAAACAGTTTCATATACTCAAGATCCAACTCTCTATCTCAAATTGGCTTTCACTGCCACTTTCTTTGCTGGTGTATTCCAATCTTCTTTGGGAATATTAAGGTTAGGATTTGTGATTGATTTTCTGTCAAAGGCAACACTGGTTGGATTCATGGCAGGAGCAGCCATAATTGTTTCATTGCAGCAGCTGAAAGGGTTGCTTGGAATAACGCACTTTACCAGCAAGATGCAAATAATTCCAGTATTAGCCTCCGTTTTCAAAGAAAAAGACGAGTGGTCATGGCAAACTATTGTACTGGGATTTGGATTCTTGGCCTTCCTCCTGATAACAAGACACATTAGCTTAAGGAAGCCAAACTTATTCTGGGTTTCAGCAGCTGCTCCATTGGCATCAGTTATTCTTTCAACTATCTTAGTCTTCCTCCTAAGAAACAAGGCTCATGGAATTGCAACGATTGGTGAATTGCCAAAAGGTCTTAATCCACCATCATCAAACATGTTATTCTTCAGTGGTCCTTATTTGGCTCTTGCTATCAAAACTGGAATTGTCACTGGGATCTTGTCTCTAACTGAAGGAATTGCAGTTGGAAGAACATTTGCTGCCCTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTATCATGAACATAGCTGGTTCTTGTTCTTCATGTTATGTCACAACAGGATCCTTTTCGCGATCGGCTGTTAACTATAATGCTGGAGCACAGACGGCAGTCTCAAATATAATCATGGCTTCAGCAGTTCTTGTGACTCTTTTGTTTCTCATGCCTCTATTCTATTACACGCCGAACGTCGTGTTAGCAGCCATTATCATCACTGCTGTGATTGGTCTGATAGATTACCAAGCTGCATATAAACTATGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCATGTGCTCCTTTTTTGGAGTTCTGTTCATCTCAGTGCCTTTAGGCCTTAGTATTGCGGTGGCGATATCAGTGTTCAAGATCTTGCTTCATGTCTCAAGACCAAACACATTGGTGTTGGGGAATATACCAGGGACAACAATATTCCACAATGTAAACCAGTATAGAGAAGCTCTTAGAATCCCTTCATTCCTCATTTTGGCTGTTGAGTCTCCCATTTACTTTGCTAATTCAACTTACCTTCAAGAAAGGATTCTGAGATGGATTAGAGAAGAAGAAGAGCATATCAAATCAAACAATGGAAGTAAATTGGAGTGCATAATCTTGGACATGACAGCTGTGACAGCCATAGATACAAGTGGGATAGACACTTTATGTGAGCTTAGAAAGATGCTGGATAAAAGATCACTTCAGCTGGTGTTGGCAAATCCAGTTGGAAGTGTGATGGAAAAGTTGCATCAATCAAACATTTTGGATTCCTTTGGTTTGAAAGGAGTGTATCTCACAGTTGCTGAAGCTGTGGCTGACATTTCATCCTCTTGGAAAGCACAACCTTGA 1959 0.4313 MGVNSTTTLKIQSEFPISMPTPPLEIHNVRLPPQRSTAQKLRQRLSDIFFPDDPLHRFKNQPSWLVKLMLGVQCLFPIFQWGPTYNLSLLRSDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSKHLGVGPVSIASLVMGSMLSETVSYTQDPTLYLKLAFTATFFAGVFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGITHFTSKMQIIPVLASVFKEKDEWSWQTIVLGFGFLAFLLITRHISLRKPNLFWVSAAAPLASVILSTILVFLLRNKAHGIATIGELPKGLNPPSSNMLFFSGPYLALAIKTGIVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGIMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQAAYKLWKVDKLDFLACMCSFFGVLFISVPLGLSIAVAISVFKILLHVSRPNTLVLGNIPGTTIFHNVNQYREALRIPSFLILAVESPIYFANSTYLQERILRWIREEEEHIKSNNGSKLECIILDMTAVTAIDTSGIDTLCELRKMLDKRSLQLVLANPVGSVMEKLHQSNILDSFGLKGVYLTVAEAVADISSSWKAQP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30259g00015 652 Pfam Sulfate permease family 90 470 IPR011547 GO:0016020
Stsc30259g00015 652 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Stsc30259g00015 652 PANTHER SULFATE TRANSPORTER 38 644 IPR001902 GO:0016020|GO:0055085
Stsc30259g00015 652 NCBIfam sulfate permease 77 640 IPR001902 GO:0016020|GO:0055085
Stsc30259g00015 652 Gene3D STAS domain 501 646 IPR036513 -
Stsc30259g00015 652 FunFam Sulfate transporter 31 501 647 - -
Stsc30259g00015 652 SUPERFAMILY SpoIIaa-like 526 643 IPR036513 -
Stsc30259g00015 652 ProSiteProfiles STAS domain profile. 521 644 IPR002645 -
Stsc30259g00015 652 Pfam STAS domain 522 640 IPR002645 -
Stsc30259g00015 652 CDD STAS_SulP_like_sulfate_transporter 522 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30259g00015 Stsc-Chr30259 80601 86522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30259g00015 24 652 Inorganic Solute Cotransporters AT3G15990 77.338 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30259g00015 K17471 - gmx:100780331 1099.35