Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30259g00008 ATGCCAAAGAAGATTAAAAAATCTCTAAGAAAATACATCTCCAAGATCAAGAACACTACTTCTCACCCACAATTGCCACAAATTCAATTAATACCCTCCAAGAAATGGGTTCTCACAGGTTGCAAGCATCCAAGGACACCTTCTTTTTCCTTAGAAAACAAGAAAAAAGATTCCCAACACACCAACAAAGATGAAGAAGCAACCCTAGCTGATGTCGATCGCTTCCTCTTCGAGAATTTCAAGTCACTTTACCTAGAAGACGGCGAGGAAAAAGCTGCCTCTACCACGCCGGCTGCCGCCGCCAACAATAAGGAGCATAATAACTCAAAAAAAGTGTCTAGAGAAGAAAGCTATGATGATCACTACAAAGGTACAAAACTAGGACCTCCTATTATTTATGATGACACACCAATTGATCTACGTGGATCAAATCGATTCTTTATGGATCGTGGATTCTCGGGGCCATATTCATCTATGAATATGACCCCGAGGGGTGATGATTATGAAGGTGGATCAAGCTCGACTTCAATAACAACACATAATGATTCCTCACCATCTTCACAATTATATCATAGTGCAAAAACTTATGTACATGATCACAATCATGATCGTGATTCTTCAAATCATCATCATGATTGTGATTGTGATCATGATTATAAGATTCTAGATAATTGTGTGGCCGTGTTGGCATCCTCGGAGAGCCCTTACGAGGACTTTAAGATTTCCATGCAAGGAATGGTGGAAGCAAGGGTAAGGAACAACCAAAGGGTGGATTGGGATTTTATGGAAGAGCTCTTGTTTTGTCATATAAATTTGAATGAGAAGAAGTCACACAAGTTCATACTAAGTGCTTTTGTGGAGTTGGTCACTGCCATGCGCCAACAGCCGGAGAATAATCCTCCGGCGACGGCTAGGAAGCCGCGGAGCGTTCGTACGGTGAGAATTGGGAGGGAGGTAAGGAACGAGACCAAAGAGGTCAGGTTGGAATTTGGGTCTACTTAA 1002 0.4192 MPKKIKKSLRKYISKIKNTTSHPQLPQIQLIPSKKWVLTGCKHPRTPSFSLENKKKDSQHTNKDEEATLADVDRFLFENFKSLYLEDGEEKAASTTPAAAANNKEHNNSKKVSREESYDDHYKGTKLGPPIIYDDTPIDLRGSNRFFMDRGFSGPYSSMNMTPRGDDYEGGSSSTSITTHNDSSPSSQLYHSAKTYVHDHNHDRDSSNHHHDCDCDHDYKILDNCVAVLASSESPYEDFKISMQGMVEARVRNNQRVDWDFMEELLFCHINLNEKKSHKFILSAFVELVTAMRQQPENNPPATARKPRSVRTVRIGREVRNETKEVRLEFGST 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30259g00008 333 MobiDBLite consensus disorder prediction 158 188 - -
Stsc30259g00008 333 MobiDBLite consensus disorder prediction 107 123 - -
Stsc30259g00008 333 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 61 292 IPR038933 GO:0045892
Stsc30259g00008 333 ProSiteProfiles OVATE domain profile. 228 291 IPR006458 -
Stsc30259g00008 333 Pfam Transcriptional repressor, ovate 232 291 IPR006458 -
Stsc30259g00008 333 MobiDBLite consensus disorder prediction 94 130 - -
Stsc30259g00008 333 MobiDBLite consensus disorder prediction 167 188 - -
Stsc30259g00008 333 NCBIfam uncharacterized plant-specific domain TIGR01568 226 292 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30259g00008 Stsc-Chr30259 50954 51955 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc30259g00008 Ovate 7.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30259g00008 - - ahf:112709854 415.231