Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30258g00030 ATGGAAGCTAACAAGGCAAGAGCTAATGTCATGCAACTAGATGAGGATTTTGAGCCCTATTGCATATGGATAACTGATCAGATTCTTCAGATTGATCTCAAAGGTGGCTTTAAAAGGGAGCAGCTTAAGTACTGCCTGAAAGGTATGCGTCACTGGAAATACAAACAGTTTAAGGTTGCAATGATGGTGGTGATTTTGGTGAAAATGCAAAACTCACTCTACAACACCTACGTCAAGCTCCTCGCCTTCGATCTTCTCTCTCTCACACAAACCCCTTCTTCTTCTTCTTCTTCTTCTTCGGTCTCAGAACCTACGTTCTCGCGAAGAGGAATCCCTCTCTCGCGAGCAGAGACACTTGGCACTGTCACACTTCGCGACTACAAGCCTCACAAGTTCCTCCGCTTCCTTATCGACGACGGAACCGCCTCCGTACCCTGCATCCTCTGGCTCAACCACATGACTTCACCCTACCTTGCTCGCCGCCGCCGCCCCGACGACCTCCGACTCATCGCCGACTCCGCTGCCAGGTTCGCCGCCGAGGTTAGGGTTGGTGTGGTGGCGAGGGTGAGGGGAAGGATCGGGTGCTACAACGGGAAGGTGCAGATCACGGTTTCTGATGTCGTCGTTGAGAGGGATCCCAATGCGGAGATACTCCACTGCCTCGATTGTATCAATCTTGCTCTTAATTGCTACAATGTTTTGCCTGGGCTTGGGCCCGAGCCTGGGCCTGGCCCTGGCCCGTCTTCTATAAGCAAGGAAAATCAAGCAGAAATGCAGAATGACGCAGCACAGCATCGTTGTTACTATTATCACTGA 816 0.5123 MEANKARANVMQLDEDFEPYCIWITDQILQIDLKGGFKREQLKYCLKGMRHWKYKQFKVAMMVVILVKMQNSLYNTYVKLLAFDLLSLTQTPSSSSSSSSVSEPTFSRRGIPLSRAETLGTVTLRDYKPHKFLRFLIDDGTASVPCILWLNHMTSPYLARRRRPDDLRLIADSAARFAAEVRVGVVARVRGRIGCYNGKVQITVSDVVVERDPNAEILHCLDCINLALNCYNVLPGLGPEPGPGPGPSSISKENQAEMQNDAAQHRCYYYH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30258g00030 271 Pfam OB-fold nucleic acid binding domain 120 208 IPR004365 GO:0003676
Stsc30258g00030 271 Gene3D - 67 234 IPR012340 -
Stsc30258g00030 271 SUPERFAMILY Nucleic acid-binding proteins 98 228 IPR012340 -
Stsc30258g00030 271 PANTHER REPLICATION PROTEIN A-RELATED 73 261 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30258g00030 Stsc-Chr30258 161797 163278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30258g00030 110 226 Core DNA Replication Machinery Family AT2G24490 26.496 5.43e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30258g00030 K23312 - jre:109018253 202.601