Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30258g00019 ATGAGTTCCTATGGTACTCAAGTTTTGGCACACTTGTTTGGCATCTTGGCCATCATACTCTTGCTTGTTTGGTTGCTGCATTACTGCGAGGGGATCGACTACGGTTCTGACATTGGGCTCCGAGTCTTCAACGTTCACCCTTTAATGATGTTTATGGGGTTTATTTTCATCAGTGGTGAAGCTATATTATCATTCCAAACAATACCAAGCCAAAGGCAAACCAAGAAGTTTTTCCACATGATGCTTCATTTGATCTCTTTAATTCTTGGGATTGTTGGTTTATGTGCCACTTTCAAGTTCCATAACATGATGGGATTTCCCAATGTTTATAGCCTCCATTCATGGATTGGCATTGGCTCATTTTGCTTGTTTGGATTACAGTGGCTTATTGGATTTGTTACATTCATGTTTCCGAGTGCTGCGGATCGAACAAGAGTGAGAGTGGTTCCATGGCACGTTGCTGGCGGGAGGGCGCTGTTGTTCATGGCGGTGTGTGCCGCGGAAACAGGGTTGATGGAAAAGTATGGTTTCTTGCGTGCGAAGTCAAATCTGCAGCCACACCAAAGAGAATCACATTTGATAAACTTCACTGGCCTTGCAATTCTGTTATTTGCAGTTTTTGTGGACCTTTCTGTTTCCATTCGTCGTTATTCTCTGTAA 660 0.4318 MSSYGTQVLAHLFGILAIILLLVWLLHYCEGIDYGSDIGLRVFNVHPLMMFMGFIFISGEAILSFQTIPSQRQTKKFFHMMLHLISLILGIVGLCATFKFHNMMGFPNVYSLHSWIGIGSFCLFGLQWLIGFVTFMFPSAADRTRVRVVPWHVAGGRALLFMAVCAAETGLMEKYGFLRAKSNLQPHQRESHLINFTGLAILLFAVFVDLSVSIRRYSL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30258g00019 219 Gene3D - 2 218 - -
Stsc30258g00019 219 ProSiteProfiles Cytochrome b561 domain profile. 9 213 IPR006593 -
Stsc30258g00019 219 FunFam Cytochrome b reductase 1 2 218 - -
Stsc30258g00019 219 CDD Cyt_b561_ACYB-1_like 36 178 - -
Stsc30258g00019 219 SMART 561_7 45 171 IPR006593 -
Stsc30258g00019 219 Pfam Eukaryotic cytochrome b561 45 175 IPR006593 -
Stsc30258g00019 219 PANTHER CYTOCHROME B561-RELATED 7 213 IPR043205 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30258g00019 Stsc-Chr30258 113316 114762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30258g00019 6 218 Chloroplast and Mitochondria Gene Families AT1G14730 52.113 2.35e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30258g00019 K08360 - gmx:100777650 294.278