Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30258g00002 ATGGGAAAAGAGACAAGCCCTTCATTAGAATGCAACATGGTAAGTTTGGTGGTATTGATGTTAATGATTGTTTCATGGATGCTACTACATAGATGGAGTCAGAGGAACAATAAGGGCCCCAAGAGTTGGCCTTTTCTTGGGTCTGTGGTTGAATTGTTGATGAACTATGATAGGATGCATGATTGGCTTGTTCAATATTTGTCCAAGTCAAAAACTGTTGTGGTTCAAATGCCATTTACAACCCATACTTACATTGCTGATCCTGCTAATGTTGAACATGTACTTAAGACTAATTTCAATAACTATCCAAAGGGTGAAGTGTATCATTCTTATATGGAGGTTTTGCTTGGAGATGGGATATTTAATGTTGATGGTGAGCTTTGGAGGAAACAGAGAAAGACTGCAAGCTTAGAGTTTGCATCAAGAAATTTGAGGGATTTCAGTACAAAAGTTTTCAGAGAATATACCTTAAAACTATCTACCATTCTCTCCCAAGCTTCTTTCCTCAACAAAGAAGTTGATATGCAGGAGTTGCTGATGAGAATGACTTTAGACTCAATATGTAAGGTTGGATTTGGTGTGGAAATTGGAACTTTGGCTCCTAATTTACCAGAAAATTCTTTTGCTCAAGCCTTTGACACTGCAAACATCATTGTCACGGTTCGATTCATCGATCCGCTATGGCGAATCAAGAAATTTCTCAAGATTGGTTCAGAAGCTAAACTCGAAAGAAGCATGAAAATCATTGATGATTTCACTTATTCTGTCATTAGGAGAAGGAAGGCAGAGATTGAGCTTGCTAAACACAATGAACAGCAAAGTAAGATAAAGCATGATATATTATCAAGATTTATAGAGCTAGGGGAAAACAATGCAACAGACAAGAGTCTGAGAGATGTTGTGTTGAACTTTGTGATCGCCGGCCGCGACACCACTGCGACGACTCTGTCGTGGGCTATATACATGGTTATGACACATGCTCATGTTGCTGACAAACTTTACTTGGAGCTCAAGACATTTGAGGAGAACAAAGCAAAAGATGAAGGTGTTACTCTTCATCAATGTGACATTGGAGACTCTGAATCATTCAATCAAAGAGTAGAACAATTTTCAAGGCTATTGAATAAAGATTCATTAGAGAGACTCCATTATTTGCATGCAGTCATTACAGAGACACTAAGATTGTATCCAGCTGTTCCTCAGGATCCTAAGGGAGTGTTAGAAGATGATCTGTTACCAGATGGAACAAAAATAAAAGCAGGAGGATTGGTAACATATGTTCCATACTCCATGGGAAGAATGGAGTATAATTGGGGACCTGATGCAGCTTCATTCATACCAGAAAGATGGTTCAAAGATGGTGTTCTCCAAAATGAATCTCCATTCAAATTCACTGCTTTTCAGGGAGGGCCAAGGATATGCCTTGGCAAGGACTCAGCATACCTACAAATGAGGATGGTGATGGCCATTTTATGCAGATTTTACAAGTTCAATTTGGTGGCTGATCATCCTGTTAAATATAGAATGATGACTATTTTGTCAATGGCACATGGCTTGAACCTAACCATACACAGGCGCCATTGA 1584 0.3902 MGKETSPSLECNMVSLVVLMLMIVSWMLLHRWSQRNNKGPKSWPFLGSVVELLMNYDRMHDWLVQYLSKSKTVVVQMPFTTHTYIADPANVEHVLKTNFNNYPKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASLEFASRNLRDFSTKVFREYTLKLSTILSQASFLNKEVDMQELLMRMTLDSICKVGFGVEIGTLAPNLPENSFAQAFDTANIIVTVRFIDPLWRIKKFLKIGSEAKLERSMKIIDDFTYSVIRRRKAEIELAKHNEQQSKIKHDILSRFIELGENNATDKSLRDVVLNFVIAGRDTTATTLSWAIYMVMTHAHVADKLYLELKTFEENKAKDEGVTLHQCDIGDSESFNQRVEQFSRLLNKDSLERLHYLHAVITETLRLYPAVPQDPKGVLEDDLLPDGTKIKAGGLVTYVPYSMGRMEYNWGPDAASFIPERWFKDGVLQNESPFKFTAFQGGPRICLGKDSAYLQMRMVMAILCRFYKFNLVADHPVKYRMMTILSMAHGLNLTIHRRH 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30258g00002 527 Pfam Cytochrome P450 39 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 SUPERFAMILY Cytochrome P450 29 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 FunFam Alkane hydroxylase MAH1 33 527 - -
Stsc30258g00002 527 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PANTHER CYTOCHROME P450 26 519 - -
Stsc30258g00002 527 Gene3D Cytochrome P450 23 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30258g00002 527 CDD CYP86A 71 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30258g00002 Stsc-Chr30258 10967 13589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30258g00002 13 526 Cytochrome P450 AT1G69500 73.423 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30258g00002 K20495 - gmx:100787802 895.575