Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30253g00020 ATGGGATTTGAAATTGCTTGCTGTTGTGTACAGTTGTGCTCAGGACTGGCTTATTACATGCAAGGATTGGTGTTGAAAACTAGAGGCCCAGTCTTTGTAACAGCATTTAATCCCCTCTGCATGGTAATTGTTGCTATAATGGGCTCCCTCATTCTAGCTGAGCAAGTATTTCTTGGCAGGTTGATTGGTGCCATTATCATTGTTTTGGGGCTGTACCTTGTAGTGTGGGGTAAAAGCAAAGATTACAAGCCACCAAGTAATGAACCTGTATTGCCAGATAAACAAATTCCAGAGGAAGCCAACACCAAAAAGGAACATTGTGATCATAAGTCTATTGACATTAGTAATTTAAGAGCTGGAATCACAACACTAGAAGAACAAGCATGA 387 0.4057 MGFEIACCCVQLCSGLAYYMQGLVLKTRGPVFVTAFNPLCMVIVAIMGSLILAEQVFLGRLIGAIIIVLGLYLVVWGKSKDYKPPSNEPVLPDKQIPEEANTKKEHCDHKSIDISNLRAGITTLEEQA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30253g00020 128 Pfam EamA-like transporter family 12 75 IPR000620 GO:0016020
Stsc30253g00020 128 PANTHER WAT1-RELATED PROTEIN 6 82 IPR030184 GO:0016020|GO:0022857
Stsc30253g00020 128 MobiDBLite consensus disorder prediction 82 107 - -
Stsc30253g00020 128 SUPERFAMILY Multidrug resistance efflux transporter EmrE 11 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30253g00020 Stsc-Chr30253 149463 150589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30253g00020 12 116 Nodulin-like Gene Family AT2G37460 55.140 5.87e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30253g00020 - - gmx:100811147 159.073