Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30253g00019 ATGATTATGGAAAGAGGCAACCCTTCGGTTTGGTATCTGAAATGGGATTTGAAATTGCTTGCTGTTGTGTACAGTGGCATAGTGTGCTCAGGACTGGCTTATTACATGCAAGGATTGGTGTTGAAAACTAGAGGCCCAGTCTTTGTAACAGCATTTAATCCCCTCTGCATGGTAATTGTTGCTATAATGGGCTCCCTCATTCTAGCTGAGCAAGTATTTCTTGGCAGGTTGATTGGTGCCATTATCATTGTTTTGGGGCTGTACCTTGTAGTGTGGGGTAAAAGCAAAGATTACAAGCCACCAAGTAATGAACCTGTATTGCCAGATAAACAAATTCCAGAGGAAGCCAACACCAAAAAGGAACATTGTGATCATAAGTCTATTGACATTAGTAATTTAAGAGCTGGAATCACAACACTAGAAGAACAAGCATGA 435 0.4092 MIMERGNPSVWYLKWDLKLLAVVYSGIVCSGLAYYMQGLVLKTRGPVFVTAFNPLCMVIVAIMGSLILAEQVFLGRLIGAIIIVLGLYLVVWGKSKDYKPPSNEPVLPDKQIPEEANTKKEHCDHKSIDISNLRAGITTLEEQA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30253g00019 144 SUPERFAMILY Multidrug resistance efflux transporter EmrE 15 96 - -
Stsc30253g00019 144 Pfam EamA-like transporter family 18 91 IPR000620 GO:0016020
Stsc30253g00019 144 MobiDBLite consensus disorder prediction 98 123 - -
Stsc30253g00019 144 PANTHER WAT1-RELATED PROTEIN 2 98 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30253g00019 Stsc-Chr30253 149181 150589 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30253g00019 1 132 Nodulin-like Gene Family AT2G37460 56.716 6.40e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30253g00019 - - gmx:100811147 201.445