Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30252g00021 ATGGCATCAAACAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAGCAAGAAGCACAAAGGATTGTCAATGCTGCTAAGACTGAAAAATTGGCAAGGTTAAAACAAGCCAAAGAAGAGGCAGAAAAGGAAGTTGCAGAATACAGAGCTCAATTAGAACGTGACTTTCAACAGAAACTTTCAGACAGTACTGGAGATTCTGGCGCTAATGTAAAGCGGCTTGAACAGGAGACTCAAGGGAAAATCCATCACCTCAAAACAGAGGCCGCAAGAATTTCCGATGATGTTGTCGCCATGCTTCTCAAGTATGTAACAAGCGTGCAAAATTAG 333 0.4324 MASNRGQGGIQQLLAAEQEAQRIVNAAKTEKLARLKQAKEEAEKEVAEYRAQLERDFQQKLSDSTGDSGANVKRLEQETQGKIHHLKTEAARISDDVVAMLLKYVTSVQN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30252g00021 110 FunFam V-type proton ATPase subunit G 3 110 - -
Stsc30252g00021 110 Coils Coil 10 59 - -
Stsc30252g00021 110 Gene3D - 1 110 - -
Stsc30252g00021 110 Pfam Vacuolar (H+)-ATPase G subunit 7 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc30252g00021 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc30252g00021 110 NCBIfam V-type ATPase subunit G 3 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30252g00021 Stsc-Chr30252 106932 108296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30252g00021 1 110 Primary Pumps ATPases(2) AT3G01390 75.455 4.22e-46 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30252g00021 K02152 - gmx:100306550 167.933