Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30252g00020 | ATGGGACCAATCTCTGCATCCTTCGGAAAACGCGACCTCTTCTGCGCCATCGACGCTAGCGGCAATCAAAACATTCTATGCTTCGGAAACAACGTCACTTCACAACCTCCATCACAATCCAATGCATCTTCATCTTCTTCCTCTCTACCTTATTTCACCGACCTTCCTCCCATGTCAGCACTTTCCGGGGGCCAAGGTTTCTTCTGTGGCATTTTAGCAAACACTTCACAGCCTTTTTGCTGGCCCGCCGGAAAACCTGCCGCTGATCCACTTCTCGTGCCCCCCGCCTACCGCAACACCGCCTACTCCCGCATTGCCGCCGGAAACTCACACGTCTGCGCAGTCAGAGGATCCTACTTCTCCGATCGCGCTTCCGGCAACGTCGATTGCTGGGAAGTCGCTCAGACGCCCAACAACTCCTTCATCGCCAAACAGACCCTTGCGTTCTACGACCAATCCGTTAGCAATCTCCAGTTTAACGACGTCGTTTCCGGCGACGATTTCTCTTGCGGCGGCGTTAGGGACGGAGGCCTCCTTTGCTGGGGTCCAAATTCCAAGAATCTCCAAGTTTCCAACGTCTCCGATAGCTTCTCCGTTTTGGCCTCCGGGAAAAACGCGATTTGCGGAGTTTCAAACTCTTCGGGCGAGTTGAAATGCTGGGGCGACCCGAATTCATATTCTGATCCTGAGGCAGCGGGTCGGGTTGAGCTGATTTCTCTGTCTGCAGGTTATGGCTTTATGGCCATTGCTTCTTCGGATTACACAACTTGTGGGATCAGAGAAGATGATCTTTTGCTTGATTGTTGGGTGGTCAACGCATCAAAGCCTAACTTTGACCCTCCCTTAGAGCTTTCAAGCCCTGGCCTTTGTCAGAACAGGCCTTGCGGTGATGGCGAGTTTGCCTTTAATGTGAGTGTTCTTAATGAGCCTGATTTGACCAGTTTGTGTGTGAGGCAGGATTTGAGGATTTGTTCACCTTGTGGCTCTAATTGCTCTCAGGGTTTCTTCTTGTCTAGTCCTTGTGCTTTCAACAATGATAGGGTCTGCACTGCTTGTTCTCTTTGCCAGAATAGCTCTTGCTGGTCTGTTTGTGGGATTCACCCATCTACACCCTTGCACTTGCACCATTTCCTTAGGTGGCTCCTCATCATTGGATCTTCTGCTTTGGGATTCCTCCTCATTTTAGTTTGTGGCTGTGTTTTTCCTCGCTTCCTGGGGAAGAGGACAAAGAAGCAATCCAACAAGTCTTGTATGGGGAAGATGGAGCAGGAGGATGATGGTGATTTGAATGGTGGTGTTGCCATTAACTCAACTCCTTCAATTGCTTCGTGTCCAGGGGTGCCTCAGGTTTTCCGTCTTTCGGAGCTGAAAGATGCTACTAATGGATTCAAAGAGTTCAATGAGCTTGGAAGGGGGAGTTATGGCTTTGTCTACAAGGCTGCTCTGGGAGATGGTAGAGTGGTTGCTGTGAAGAGGGCTAATGCTGCCACAATTATACACACCAACAACCGTGATTTTGAGATGGAGCTTGAAATCTTGTGCAAGATTAGACATTGTAATATTGTTAACCTTGTTGGTTACTGCGCGGAGATGGGGGAAAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACACTTTATGATCACCTCCATGGTGGCCTTTCTCCTCTTAATTGGACCCTTAGATTGAAGATTGCTATGCAGGTTGCAAAGGGCCTTGACTATCTTCACAGGGAGCTTTCACCTCCCGTACCCCACAGGGATCTCAAGACCTCCAACATTCTCTTGGATTCACAGTGGGGGGCTCGCATTTCGGATTTCGGACTAATCACTTCCACTGACAAGGACCTTCCAGGGGACTTGGATACTGATGTTTATAATTTTGGGATTGTGTTGCTTGAGATTCTAAGTGGCAGGAAAGCTTGTGACAGAGATTTCAATCCTCCGGACATAGTGGAGTGGGCAGTGCCTTTGATCAAACAGGGCAAGGCGGCTGCTATCATCGATCGCTACACGGCTCTGCCCAGAAACGTTGAGCCTTTGCTTAGGCTTGCCGATATAGCTGAGCTTTCTGTCAGAGAGAATCCAGCCGAGCGTCCTCCATTGCCGGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTAATTTTATAG | 2160 | 0.4917 | MGPISASFGKRDLFCAIDASGNQNILCFGNNVTSQPPSQSNASSSSSSLPYFTDLPPMSALSGGQGFFCGILANTSQPFCWPAGKPAADPLLVPPAYRNTAYSRIAAGNSHVCAVRGSYFSDRASGNVDCWEVAQTPNNSFIAKQTLAFYDQSVSNLQFNDVVSGDDFSCGGVRDGGLLCWGPNSKNLQVSNVSDSFSVLASGKNAICGVSNSSGELKCWGDPNSYSDPEAAGRVELISLSAGYGFMAIASSDYTTCGIREDDLLLDCWVVNASKPNFDPPLELSSPGLCQNRPCGDGEFAFNVSVLNEPDLTSLCVRQDLRICSPCGSNCSQGFFLSSPCAFNNDRVCTACSLCQNSSCWSVCGIHPSTPLHLHHFLRWLLIIGSSALGFLLILVCGCVFPRFLGKRTKKQSNKSCMGKMEQEDDGDLNGGVAINSTPSIASCPGVPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALGDGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLVGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWTLRLKIAMQVAKGLDYLHRELSPPVPHRDLKTSNILLDSQWGARISDFGLITSTDKDLPGDLDTDVYNFGIVLLEILSGRKACDRDFNPPDIVEWAVPLIKQGKAAAIIDRYTALPRNVEPLLRLADIAELSVRENPAERPPLPDIASWLEQIVKDGLIL | 719 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30252g00020 | 719 | SUPERFAMILY | RCC1/BLIP-II | 22 | 263 | IPR009091 | - | |
Stsc30252g00020 | 719 | SMART | serkin_6 | 463 | 709 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30252g00020 | 719 | ProSiteProfiles | TNFR/NGFR family cysteine-rich region domain profile. | 294 | 349 | IPR001368 | GO:0005515 | |
Stsc30252g00020 | 719 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 584 | 596 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc30252g00020 | 719 | FunFam | serine/threonine-protein kinase-like protein CCR1 | 433 | 540 | - | - | |
Stsc30252g00020 | 719 | PANTHER | OS01G0750732 PROTEIN | 299 | 714 | - | - | |
Stsc30252g00020 | 719 | FunFam | Serine/threonine-protein kinase-like protein CCR1 | 618 | 716 | - | - | |
Stsc30252g00020 | 719 | ProSitePatterns | Protein kinases ATP-binding region signature. | 469 | 491 | IPR017441 | GO:0005524 | |
Stsc30252g00020 | 719 | Gene3D | - | 4 | 141 | IPR009091 | - | |
Stsc30252g00020 | 719 | Gene3D | Transferase(Phosphotransferase) domain 1 | 619 | 716 | - | - | |
Stsc30252g00020 | 719 | Gene3D | Transferase(Phosphotransferase) domain 1 | 541 | 618 | - | - | |
Stsc30252g00020 | 719 | SUPERFAMILY | Protein kinase-like (PK-like) | 439 | 710 | IPR011009 | - | |
Stsc30252g00020 | 719 | Pfam | Protein kinase domain | 463 | 614 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc30252g00020 | 719 | Gene3D | Phosphorylase Kinase; domain 1 | 436 | 540 | - | - | |
Stsc30252g00020 | 719 | Gene3D | - | 144 | 287 | IPR009091 | - | |
Stsc30252g00020 | 719 | ProSiteProfiles | Protein kinase domain profile. | 463 | 709 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30252g00020 | Stsc-Chr30252 | 101035 | 103281 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30252g00020 | 1 | 711 | Receptor kinase-like Gene Family | AT3G59420 | 30.075 | 1.24e-100 | 327 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Stsc30252g00020 | Pkinase | 1.3e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30252g00020 | - | - | aip:107626497 | 1227.62 |