Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30252g00001 ATGAAGGAGAAATCACATTCTTCGCAGTCCAAGAGCAGCACAAGTTGGATTGTGCTCAACTCTAAGGGTCACTGTTCCATCGTCGATGTGGACAAGCATCGCATCATGAATCTAGCTCATATTCATTATCGTGATTTTCGGATTCTAGACCCCCTACTTTCTTACCCGTCAGCAATTCTAGGTCGAGACAACGCTATTCTGCTTAACTTAGAGGTATTTCTCCGAGATCCACTGGATGAAAATGTAGTCCCTGTTGTTGAAGAACTCAAAAGGCGATTGGCTCGCCATCTAGACAACTCAACCTTGGAATTTCAAGCTTTGGAGGTAGCCCTAGAAGGCATTTGTAGTTTTCTCGCTGCACGTACAACAGAACTAGAAATGGCTACATATCTCTCGCTGGAAAAGCTGACTAACAAGGTCAGTAGCCTTAATTTGGATGGTGTTCGAAAACTGAAGTGCACTACGTCTACGTTAACTGCTAAGGTTCATAAGGTGAGAGATGAGCTTGAGCGTCTATTGGACGATGACCAAGATATGGCTGACCTGTACTTGAGAAGAAAGCTGTTTTCGCCAGTTAGTATATCAGGTGCCGCTAATAAGGCTTCTATCTCCCCCACCTTAGGGTCCAAGGTATCAAGTTTATCAACCATTCACGGTGAAGAAAATGATGTAAAGGAGCTTGAAATGTTATTGGAGATGAGGGAGTACATTGACGGAACAGAGGATTATATTAATATCCAGATTGACAGTCGTCGAAATAAGTTGATTAAGTTGGAGCTCGTCCTCAGCTCAGGCAATCTTTGTTTAGCTATTTTTGCATTGGTGACTGATATATTTGGCTTGAGTTTTCCATACGATTGGAATAAGAATCATGGTTTCCTGTTCAAATGGGTAATTATTGTCACAGCAACATGCACTGCATCTCTGTTTCTTACAATTATTGCCTATGCTCGCAAGAAGGGATTGCTTTGA 972 0.4218 MKEKSHSSQSKSSTSWIVLNSKGHCSIVDVDKHRIMNLAHIHYRDFRILDPLLSYPSAILGRDNAILLNLEVFLRDPLDENVVPVVEELKRRLARHLDNSTLEFQALEVALEGICSFLAARTTELEMATYLSLEKLTNKVSSLNLDGVRKLKCTTSTLTAKVHKVRDELERLLDDDQDMADLYLRRKLFSPVSISGAANKASISPTLGSKVSSLSTIHGEENDVKELEMLLEMREYIDGTEDYINIQIDSRRNKLIKLELVLSSGNLCLAIFALVTDIFGLSFPYDWNKNHGFLFKWVIIVTATCTASLFLTIIAYARKKGLL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30252g00001 323 Gene3D Magnesium transport protein CorA, transmembrane region 80 255 - -
Stsc30252g00001 323 Gene3D - 1 74 - -
Stsc30252g00001 323 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 323 IPR039204 -
Stsc30252g00001 323 CDD Mrs2_Mfm1p-like 16 322 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30252g00001 Stsc-Chr30252 2357 8387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30252g00001 15 298 MRS2 Gene Family AT5G64560 54.971 6.65e-102 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30252g00001 K16075 - adu:107463647 414.461