Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30251g00028 ATGTCTGCTTGGATTCTTGTACTTGCTACTATTCTAGTAGCAATCTTAATTTACCAAACGATAAAGTTCATAACTCGTCACTCTTCATCATCGCTACCACTGCCACCGGGTCCAAGGCCATGGCCTATCATAGGAAACCTTCCACACATGGGCACTGTCCCACACCATGCCCTCGCGGCCTTGGCTTGCACCCACGGCCCGCTCATGCACCTCCGCCTAGGTTTTGTGGATGCCGTGGTGGCATCATCGGCCGCGGTGGCTCAACAATTTTTAAAGGTTCACGATGCCAATTTCTCTAATCGGCCGCCCAACGCCGGGGCTAAATACATAGCTTATGACTATCATGACATTGTTTTTGCACCCTATGGCCCCCGGTGGCGGTTGCTCCGGAAAATCACCACAACTCACATGTTCTCCGGGAAGGCCATGAATGATTTTAGACACATCCGACAGGAAGAGGTAGCAAGATTAACGCACAATCTAGCAAGTTCATCCCCAAAAGCAGCAGTGAACCTTGGGCAGCTTCTTAACGTGTGCACCACCAACGGAATAGCAAGGGTACTACTCGGGCGCCGAGTCTTCGACGACGGCAACGGCGGCTGCGACCCGAGGGCCGAAGAGTTCAAGTCCATGGTGGTGGAGCTCATGGTTCTTGCCGGAGTTTTCAACATCGGAGACTTCATTCCGGCGTTGGAGTGGCTTGATCTTCAGGGCGTGCAAGCTAAGATGAAGAAACTACACAAGAGGTTTGACGCATTCTTAGGAAGCATTGTTGAGGAACACAATAATAATAAGCAAGGTTGTTCCAATAAGAGTGATGAGAACCACCAAGATTTGTTGACTACGTTGCTGTCCCTCGAAGACGACGATGGAACCAAACTCACCCACACTGAGATCAAGGCCCTGCTTTTGAATATGTTTGCAGCAGGAACAGACACAACATCGAGCACGATAGAATGGGCAATTTCGGAAATAATTAAAAACCCAAGAATACAAGCTCAAGTTCAAGAAGAGTTGGACTCAGTAGTGGGCCGAGACAGGCTCGTAACTGAATTGGACTTAGCCCACCTACCTTACTTAGAAGCAGTGGTAAAGGAAACGTTTCGTCTCCACCCATCAACCCCTCTTTCCCTGCCACGTGTTGCATCAGAGAGCTGTGAGATCTTCAACTACCACATCCCAAAAGGCGCAACCTTGCTTGTGAACATATGGGCCATATCACGTGACCCAAAAGAGTGGGCTGAGCCACTAGAGTTCAGGCCCGAGAGGTTCCTCCCAGGTGGGGAGAAAGCCCATGTTGATGTTAAGGGGAATGACTTTGAGGTTATACCGTTTGGTTCAGGGCGTAGGATATGTGCTGGAATGAGCCTGGGTGTGAGGATGGTTCAGTTGGTGACTGCCACATTGGTCCATGCATTTGAGTGGGAACTGGAAAATGGGTTGAACCCAGAAAAGCTGAACATGGATGAGGCCTATGGGCTTACTCTCCAAAGAGCAGTGCCACTTACGGTGCACCCTCGCGCTAGGCTCTCACCACGAGTCTACTCGTCGTGA 1554 0.5026 MSAWILVLATILVAILIYQTIKFITRHSSSSLPLPPGPRPWPIIGNLPHMGTVPHHALAALACTHGPLMHLRLGFVDAVVASSAAVAQQFLKVHDANFSNRPPNAGAKYIAYDYHDIVFAPYGPRWRLLRKITTTHMFSGKAMNDFRHIRQEEVARLTHNLASSSPKAAVNLGQLLNVCTTNGIARVLLGRRVFDDGNGGCDPRAEEFKSMVVELMVLAGVFNIGDFIPALEWLDLQGVQAKMKKLHKRFDAFLGSIVEEHNNNKQGCSNKSDENHQDLLTTLLSLEDDDGTKLTHTEIKALLLNMFAAGTDTTSSTIEWAISEIIKNPRIQAQVQEELDSVVGRDRLVTELDLAHLPYLEAVVKETFRLHPSTPLSLPRVASESCEIFNYHIPKGATLLVNIWAISRDPKEWAEPLEFRPERFLPGGEKAHVDVKGNDFEVIPFGSGRRICAGMSLGVRMVQLVTATLVHAFEWELENGLNPEKLNMDEAYGLTLQRAVPLTVHPRARLSPRVYSS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30251g00028 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc30251g00028 517 SUPERFAMILY Cytochrome P450 35 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PANTHER CYTOCHROME P450 98A9 7 516 - -
Stsc30251g00028 517 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 FunFam Cytochrome P-450 19 23 507 - -
Stsc30251g00028 517 Gene3D Cytochrome P450 19 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30251g00028 517 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30251g00028 Stsc-Chr30251 166689 170586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30251g00028 10 516 Cytochrome P450 AT5G07990 63.548 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30251g00028 K05280 - gmx:547475 798.119