Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30251g00002 ATGAAAGACGTGAGTTCCCCACGCAGGAAGAACCCCGATTTGGTTGTGAAGCCTATCTCAAGTTCAAGGCATCCTATTGAACCTGCACCATGGAAGCGGCGAGATAGAAATCTAAGTTCACCAAGACCAAGTTCCAGGGCCATGAAGGCTACAAGAATAACAGATTCATTCCCTTCAGTTTACAGTGAAGTTGAGAAGAGACTGAAGAATCTTGAATTTGAGCAATCTGGGAGAGATCTCAGAGCTCTCAAACAGATACTAGAGGCAATGCAAGCAAAGGGGCTGCTAGAGACAAGACAGGAAGAACAAGCTTCAAATTTTGTAGGAAATCAAAGAGGCCATGAACCAAAACCTCTGAGTCTAACTCAGAATTCTAGGACAGCAAGGAAACAAAGTCCTCAGGGAAACAATATTGCATCTTCAACTTTCAGGGGATATGACTCAGCAAGGAACTTTGAATCTCCAATTGTAATCATGAAACCTGCAAAGCACATTGAGAAAAATGGAATTTCATCTTCTTCAGTTATTCCACTTGTTGATCTTTCTGATTCCCATAAACTCCAGAGTGTGGGAATGGGTGTACGTTCAGGTAATAGAAAGGATACAGGTTCTGGTCGAATAACAAAAGATCAGCCTCCTAGAAACAATTACAGGGAAGCTTCTACTAGCTCCAGTGAAAAGAAAGCAAGTAGCAAGACTATCAGATCAACACAATCACAACCAAGTTCAGTAAAGAACTCAGGGTCTGTTAGCCCAAGATTGCAACAAAAGAAGTTAGAACTTGAGAAGCGCTCTCGCCCACCAACCCCTCCATCAGATTCAAGTAAACCGAGAAGGCAATCTGGTAAGCAGACCACAGAATCAGGTTCTCCGGGTCGAAAACTGAGGAACAAAGTCCCTATTTCACAACAAAGTGAAGACCAACTTAGTGAAATAAGCAATGAATCAAGAAGTTTGAGTTTCCAAGGGGATGAAGCATCACTACAATCAGGTAGTGCCACTATTGAGTCAAAGATGGATATGGAAGTAGCCAGCAATTTACAACCTGCTGAAAGCCAAAGCCCGTCTCTAAAGGCTTTTGAGCAAGTGGTTTCTGGAAAAATACAGAAGAAATCAACTCTGATGTTGGATGAGGATGAGCCTATTTCAGAACTTGCAATGGATGCTCCCGATCATCCGAGCCCTGTATCGGTTCTGGACGGCTCAGTATACAGAGAGGGTGTGCTATCCCCAGTCAAGCTCATATACAATGCTCCCAAAGCTGGTGATACTCAATCTAAAGATGAAGATTATGAATGTCAGTGGAACACTGCAGATGATAGCCTTTCAGTTAACAGCGAGATCAACCGCAAGAAATTGCAAAGCATAGATCATCTTGTTAAGAAGCTTAGACGGTTAAACTCGAGTCATGACGAGGCTAGGATCGATTACATTGCTTCCCTTTGCGAGAACTCAAATCCAGACCACAGATACATATCAGAAATACTACTGGCTTCTGGTCTCCTACTCAGAGATTTGAGTTCAGAATTGCAGACATTTCAACACCACTCGTCGGGTTATCCCATTAACCCCGAGTTGTTCCTTGTGTTGGAGCAGACCAAGGCAAGTAGCTTTCTTTCTACAGAAGAAATCAGCACTGAAAAGGTTGATTACAAGAAGACGAACACAGACAAGTCTCACAGGAGACTCATCTTTGATGCTGTGAATGAGATTCTTGGCAAGAAACTAGCTTCTCCTCCTGAACCATGGTTGAAGCCTAATGGACTAGCAAAGAAGAACCTTAATGCACAGAAAATTCTAAAAGAGCTGTGCTTTGAGATAGAGAAAATTCAAGCGAAGAAGCCCGAATTCACAGAAGATGAAGGTGATGGCATAAAAAGTCTACTATGTGAAAATGTTATGAATGGATCAGAAAGTTGGACAATCTTCCATGGTGAAACATCTGGGGTTGTGTTAGATGTTGAGAGACTGATATTCAAGGACTTGATTGATGAGATTGTGATTGGGGAATCAACTGGCTTGAGAATCAAGCCAGGTAGGCGCAGGAAGCTGTTTGGAAAATAA 2064 0.4244 MKDVSSPRRKNPDLVVKPISSSRHPIEPAPWKRRDRNLSSPRPSSRAMKATRITDSFPSVYSEVEKRLKNLEFEQSGRDLRALKQILEAMQAKGLLETRQEEQASNFVGNQRGHEPKPLSLTQNSRTARKQSPQGNNIASSTFRGYDSARNFESPIVIMKPAKHIEKNGISSSSVIPLVDLSDSHKLQSVGMGVRSGNRKDTGSGRITKDQPPRNNYREASTSSSEKKASSKTIRSTQSQPSSVKNSGSVSPRLQQKKLELEKRSRPPTPPSDSSKPRRQSGKQTTESGSPGRKLRNKVPISQQSEDQLSEISNESRSLSFQGDEASLQSGSATIESKMDMEVASNLQPAESQSPSLKAFEQVVSGKIQKKSTLMLDEDEPISELAMDAPDHPSPVSVLDGSVYREGVLSPVKLIYNAPKAGDTQSKDEDYECQWNTADDSLSVNSEINRKKLQSIDHLVKKLRRLNSSHDEARIDYIASLCENSNPDHRYISEILLASGLLLRDLSSELQTFQHHSSGYPINPELFLVLEQTKASSFLSTEEISTEKVDYKKTNTDKSHRRLIFDAVNEILGKKLASPPEPWLKPNGLAKKNLNAQKILKELCFEIEKIQAKKPEFTEDEGDGIKSLLCENVMNGSESWTIFHGETSGVVLDVERLIFKDLIDEIVIGESTGLRIKPGRRRKLFGK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30251g00002 687 MobiDBLite consensus disorder prediction 1 53 - -
Stsc30251g00002 687 PANTHER LONGIFOLIA PROTEIN 3 685 IPR033334 GO:0051513
Stsc30251g00002 687 MobiDBLite consensus disorder prediction 275 330 - -
Stsc30251g00002 687 Pfam Domain of unknown function (DUF4378) 488 665 IPR025486 -
Stsc30251g00002 687 MobiDBLite consensus disorder prediction 107 143 - -
Stsc30251g00002 687 MobiDBLite consensus disorder prediction 189 330 - -
Stsc30251g00002 687 MobiDBLite consensus disorder prediction 208 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30251g00002 Stsc-Chr30251 19681 22401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30251g00002 2 686 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 48.951 4.02e-177 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30251g00002 - - gmx:100787391 833.943