Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30250g00015 ATGCAGTTATATCATCATCCATTTGATTTAGATAGTCTTAAGGTTAGACTTGCATTGGAAGAGAAAGCTGTCGATTATACGTCTCACCATGTGAATCCAATAACTGGAAAGAACTTGGATTCCTCATTCTTCAAGATGAATCCGAGCGGAAGACTACCCGTTTTCCAAAATGGATCTCACATCATATACAAGACTATAGATATAATACAGTACATAGAGAGAATCGCTGTGGTTTCGGCAGGGTCTGAGAATATCAGTACCAGTGGCAGGGAAGTGATTGAATGGATGCAGAAGATACAAGAGTGGGAACCAAAGTTCTTTACACTTTCCCATATACCCGATAAATACCGCATTTACGTTTCAAAATTTATAAGGCGTGTTGTGATTGCCCGTATGTCTGAATCCCCTGAATTAGCAGGGGCTTACCATCGGAAGTTAAGAGAAGCCTACCAAACCGAAGAAAAAATGAAAGACCCAGATGTTGTGAAGAGGAGTGAGGAGCACTTGGTTAGACTTCTTGACGAAGCAGAGCGGCAGCTAGGCGAAACACCATACTTGGCTGGTCAAGACTTCACCATGGCTGATGTTGTGCTTATCCCAGTGCTGACTCGATTAGTGCTGTTGGATTTAGAGAAAGTGTACATAACCAATAGGCCAAACATCGCCGAATACTGGGTTTTGGTTCAACAGAGGCCTAGTTATAAAAAGGTGATTGGTAAGCATTTTGATGGTTGGAGAAAACACAAAACATTAGTAAAAACATGGTGCTTTGTTCATATTAGAAGTCTGCTGAAGAGGTATTAG 804 0.4129 MQLYHHPFDLDSLKVRLALEEKAVDYTSHHVNPITGKNLDSSFFKMNPSGRLPVFQNGSHIIYKTIDIIQYIERIAVVSAGSENISTSGREVIEWMQKIQEWEPKFFTLSHIPDKYRIYVSKFIRRVVIARMSESPELAGAYHRKLREAYQTEEKMKDPDVVKRSEEHLVRLLDEAERQLGETPYLAGQDFTMADVVLIPVLTRLVLLDLEKVYITNRPNIAEYWVLVQQRPSYKKVIGKHFDGWRKHKTLVKTWCFVHIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30250g00015 267 Pfam Glutathione S-transferase, C-terminal domain 160 224 - -
Stsc30250g00015 267 CDD GST_N_family 1 73 - -
Stsc30250g00015 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Stsc30250g00015 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Stsc30250g00015 267 Gene3D Glutaredoxin 1 75 - -
Stsc30250g00015 267 Gene3D - 114 238 - -
Stsc30250g00015 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 114 251 IPR010987 -
Stsc30250g00015 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Stsc30250g00015 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Stsc30250g00015 267 SUPERFAMILY GST C-terminal domain-like 147 240 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30250g00015 Stsc-Chr30250 110011 112222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30250g00015 1 267 Glutathione S-transferase Gene Family AT1G77290 68.539 8.70e-142 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30250g00015 K22077 - gmx:100792543 474.167