Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30249g00024 ATTTATGACAAACTTCTCTTGCAGATTTTTCGATTCTGTAGATCTAAATGCCACAAGAACTTCAAAACGAAGAGGAATCCTTGGAAAGATTCAACCTTTGAGTTTGAAAGAAAGCGAAACAGGCCAGAGAGATATGACAGGAATCTTGCAAAGAACGTCCTCAAGGCCATTCCAAAGATTGATAAGATCAGAGTCACTAGGGAGGAGAGGCACCATAAGAATAGGATGAAGGGCAATAAAGAAAAGTTAAAGAAGGAGGCAGCAAAGGAGTTGGAGCAGGGCATCAGTTTGGTAAAAGCTCCTTCGGCGCTTCAGAAGGACCCGTCTCTCACATTAAGGCAAAAGATCAAAGTCTCTATTTCCCAACGGCAATCAGAGGACAACAATGCCATGACAGAGTGA 402 0.4254 IYDKLLLQIFRFCRSKCHKNFKTKRNPWKDSTFEFERKRNRPERYDRNLAKNVLKAIPKIDKIRVTREERHHKNRMKGNKEKLKKEAAKELEQGISLVKAPSALQKDPSLTLRQKIKVSISQRQSEDNNAMTE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30249g00024 133 Coils Coil 73 93 - -
Stsc30249g00024 133 Gene3D Ribosomal protein L24e 4 41 IPR038630 -
Stsc30249g00024 133 PANTHER 60S RIBOSOMAL PROTEIN L24 29 124 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30249g00024 Stsc-Chr30249 181669 182293 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30249g00024 8 133 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 52.448 5.84e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30249g00024 K02896 - gmx:100778077 184.496