Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30249g00017 ATGAGATTGGAAAAGTGCTGGTTTTGTTCTTCAACCGTGTACCCTGGTCATGGAATCCAGTTTGTTCGTAACGATGCGAAGATTTTTCGATTCTGTAGATCTAAATGCCACAAGAACTTCAAAATGAAGAGGAATCCTCGGAAAGTAAAATGGACCAAGGCATATAGACGAGTTCATGGAAAGGATATGACTCAGGATTCAAGCTTTGAGTTTGAGAGAAAGCGAAACAGGCCAGAGAGATATGACAGGAATCTTGCGGAGAACGTCCTCAAGGCCATTCCAAAGATTGATAAGATCAGAGTCACCAGGGACGAGAGGCACCATAAGAATAGGATGAAGGGCAAGAAAGAAAAGTTACAGAAGGAGGCAGCAAAGGAGTTGGAGCAGGGCATCAGTTTGGTCAAAGCTCCTTCGGCACTTCGGAAGGACCCGTCTCTCACATTACCGCAAAAGATCAAAGTCTCTGTTTCCCAACGGCAATCAGAGGACAACAATGCCATGGAGGAGTGA 510 0.451 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSSFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTRDERHHKNRMKGKKEKLQKEAAKELEQGISLVKAPSALRKDPSLTLPQKIKVSVSQRQSEDNNAMEE 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30249g00017 169 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Stsc30249g00017 169 Coils Coil 109 129 - -
Stsc30249g00017 169 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Stsc30249g00017 169 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Stsc30249g00017 169 SMART 4TRASH 6 44 IPR011017 -
Stsc30249g00017 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Stsc30249g00017 169 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Stsc30249g00017 169 MobiDBLite consensus disorder prediction 104 146 - -
Stsc30249g00017 169 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Stsc30249g00017 169 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30249g00017 Stsc-Chr30249 133948 135377 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30249g00017 1 169 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 68.047 2.85e-82 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30249g00017 K02896 - gmx:100793564 309.686