Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30248g00018 | ATGTCTTACCAATCAGCAGAGACATGGAAGTACGATGTGTATATGAGTTTCCGAAGCGAGACTCGCTACCCATTCTGCTCATATCTGTATCAAGCTTTCAGGATGGCTGGAATTCATGCTTACACCGACGATACGGAAAGTCGGACTGGAGGCGAGTTGACATACACAGTGATTCAAGCAATCGAAGCTTCTAGAGTTTCTGTTGTTGTACTGTCACAAGGTTATTCTAGATCAAGATGGTGCCTGGAGGAGCTGGCGAAAATAATGGAGTGTAGAAGCTCGATACGACGTCAGACCGTCATTCCGGTGTTCTACCGTGATGATCCGGCAGATGTTGGCCACCAGAGAGGTCCTTTTGTTAAAGCTTTTCGAAGTCACAGGAATGGGTTCTCAGATGAGAGTGAGAGAATCGACGCATGGAGGACAGCGCTCAATCAAGCTGCTAACCTTCCTGGATTTGAAATCAGCATCAACAAAGATGAATCTGAAGTTATCAGAAATATTGTTGAACATGTAACTAAGCTGCTAGTTTCGGAAGAGTTGTTCATCACAAAGCATCCAGTAGGAGTACAATCTCGAATGGAAGAAGTGATTCAACAATTACATTCTCATACATCACCAGATGGTATCGTGCTAACGGGGATATGGGGTATGGGAGGAGTGGGTAAAACAACCATTGCCAAAGCTGTTTATAATCAAATCCGTTACAGTTTTGATAGACCAATGTTCCTCCCAAACATTAGGGAGATGTGGGAGAAAAACAAACTGGTTTTTCTACAAGAACAACTGTTGAACTTCATTTGCAAAGCAGGGGTACAGGTACAAAGCATCGCATCAGGGGTAGCTAAATTAAAGGAAAAACTTTGCCAAGAAAAGGTACTTATTGTACTTGATGATGTAACTAATATATATCAGTTGAATGCCTTGTGTGGAAGTCGAGAATGGTTTGGTCCAGGGAGTGTAATAATCATCACAACAAGAGATAGACGCCTGCTTCATATGATTGGAGTTGACCATGTGTATCAAGTGACCAAAATGGATTCCGAAGAATCTCTTGAACTTTTTCGTCGGAATGCATTTACGCAAGCAACTCCACAAGAGTTTGATAGAGTTGAAACAGATGTAGTTGCATGTTGTGGGGGGTTGCCATTGGCCCTTGTAACAATTGGCTGTCAATTGTTTGGAAAGACGATAGATGAGTGGGAGATTGTATTAGGTGGACTCAAAAGGCGTCCCCATCCGGGCGTACATGATGTATTGAAAAGAAGCTATGATGGCTTAAATGATGAACAACAGAGAGAAATATTTCTTGATATAGCTAGCTTTTGTGTTGGCATGGAAAGAAGCGAGGCATTGCAAACTCTAAGTGATGCCTTTGGAATTCCCCTAGATGAAATCAGTTTTCTTCAAGAGCAGAGTCTTATAGAATTTGATGATCAAGACATGGTTCGGATGCATCCTCTGTTGCGAGACATGGGAACACAAATCGTTCGAGAGCTATCACAAACTCAGGCTCAGGAAAGGAAGTACGATGTTTTCGTGAGTTTTCGAGGCGGGGACACTCGTTCAGGATTTACATCACATCTGCATACATATCTCCAAAATGCTGCATTAACTGTTTTTAAGGATGATGACGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATGGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTGGTTGTTTTGTCAACCCACTATGCTAATTCAAAATGGTGCCTGCAAGAGCTTGAGAACATCATGGTATGCCACAGAACAAAAGGTCAACTGGTTTTCCCTGTATTCTTAGGAGTACATCCCGCAGATGTACGCTATCAAAGGAAAGAGAGTGCATTTGGGAAAGCTTTTGAAAGTCTTATAAATGGTAAAAGACCAGTGGAAGCAGATAAGGTGCAAAGATGGAAAACAGATCTTTTTGAAGTCAGTAGCTTTTCAGGGAAGACTGTGACAGACTCCAGATCAATAGGTCAAGCACTGCAATACCGCGAACCTGGATTTTATTCAAGGATCTGTCATTGGTTAATGAGCTGCTGCATACCCAATAATGAGAGTTTTGAATCTTCAACACTTACGAATGAAGCTGAAGATATCAAAAGAATTGTTGAAGATGTTACTCGTTTACTAGATAAGACAGAGATGTCCATTGCAAGACATCCAGTGGGAGTAGAATCTCGTGTGAAAAAGGTGATTGAAGAATCAAACATTCTTAAGGTGATTGAAGAATCAAACATTCAAGGACGAACAAAAGATGTTCTGACAATTGGGATAAATGGCATGGGGGGAATTGGTAAAACAACTATTGTCAAAGCCATCTATAATCAAATCGGTCGCAAGTTTGAAGCCAGGAGCTTCCTCCAAGACATTAGGAAAACTTGGCAGCAAGATAATGGAAATGTTTCCTTGCAACAGCGACTTCTTGAGGATATATTCAGAGGAACTAGGATAGAGATACATAACATTGATTCTGGGAAGCAAATATTAAAGGATAAGCTTAAAGGTAAAAAGGTATTCATTGTGCTTGACGATGTGACTGATTTGGACCAACTGGATGCTTTGTGTGGAAGTGGTGAATGGTGTGGCCCTGGAAGCATATTAATCATCACAACAAGGAATAATGATCTTCTTAAAGTGTGTAAACACACATTCAGTGAACAAGAGATGAAATTGGAACCAGCTGAATGCCTTGAGCTTTTTAGTTGGCATGCATTCAGAAAACCATGGCCTCCCGAAGCTACTGATGAGTCTTTGATTGAGCTTTCCGAAGAAATAGTTAAATATTGTAGTAGATTGCCACTAGCTCTGGAAGTTCTTGGGTCCAATTTGTTTAACTGTGGAATAGAAGTTTGGAATACAACATTGGAAAGACTGAAATCAATTCCCCCCGATGGAGTCCTGGAGAAACTACAAATAAGTTATGATGGCTTAAGAAATAAAGATGAAAAAGAAATATTCCTTGACATCGTATGCTTCTTCATAGGGATGGATCGAAATGAAGTTATCCAGATATTAAATAGTTGCGGCCTCGATGCAGAATATGGAATCAATCTCCTTAAAGAGCGAAACCTTGTCACTGTTGATAAGAATAATATGCTTGGAATGCATGATTTGGTAAGAGATATGGGAAGAGCAATAATTCGTGAGCAATCACCTAAACTTGAAGAGCGCGGGAGATTATGGTACCACCAAACAGAAACAGAAACAGAAACAAAAACAAAAACAAAAACAAAAACAGAAACACAATTCTCAGTGCTTAAACTATTAAAGATTCAGGAGGAGGAGGGAGAAAAATTAAAAAAGGTCACGGGATTGAGTTTGAAGCTGCCAACCACCAATTCGTTCTGTTTGAGTGAAAAAACATTTAAGACTATGCCTAAACTCAGATTACTTCAACTCGCCAGTGTAGAATCTAATGGAAAGTTCAAAAATCTTTCAAGATATCTTAAATGGATGAGTTGGCATGGATTTCCTTTGAAACACACTCCCATGGACTGCTTTGAATCAGATACAATTTCCATTGAGTTAGAAAACAGCAAGCTCGAAGTTCTATGGAAGGAGCCGCCGATGAAGCCCATAAACAATCTGAAGATTTTAAATCTTAGTCATTCTCATGACTTGAGAACAAGCCCAGATTTTTCATGGTTACCTAGTCTTGAGAAGTTAGTACTAAAAGATTGTACAAATTTGTATGAGATTTCCCCTACCATTGGAAGTCTAGAAAAAATCCTTCGGATCAATTTAGAAGGTTGTACAAACCTTCGTGAACTTCCAAGAAGCATATACAAGTTGAAATCTCTTGAAACACTCATCATCTCTGGGTGTTCAAGGATTGACAATTTAGAAGAAGATGTGGGACAAATGGAATCCTTGGCAGTGCTAAAAGCTGATAACACTGCCATAAAACAAGTGCCAATTGAAGCGCTAGAAAAATTAAAAAACCTAGGATATATTTCTGTGCTTCGCTTTGAAGGAAAGGCAGATGATGTGATTCAATCAATCAAGTCTTCATCAGGCTACTCATCAACAGTTTAA | 4062 | 0.3983 | MSYQSAETWKYDVYMSFRSETRYPFCSYLYQAFRMAGIHAYTDDTESRTGGELTYTVIQAIEASRVSVVVLSQGYSRSRWCLEELAKIMECRSSIRRQTVIPVFYRDDPADVGHQRGPFVKAFRSHRNGFSDESERIDAWRTALNQAANLPGFEISINKDESEVIRNIVEHVTKLLVSEELFITKHPVGVQSRMEEVIQQLHSHTSPDGIVLTGIWGMGGVGKTTIAKAVYNQIRYSFDRPMFLPNIREMWEKNKLVFLQEQLLNFICKAGVQVQSIASGVAKLKEKLCQEKVLIVLDDVTNIYQLNALCGSREWFGPGSVIIITTRDRRLLHMIGVDHVYQVTKMDSEESLELFRRNAFTQATPQEFDRVETDVVACCGGLPLALVTIGCQLFGKTIDEWEIVLGGLKRRPHPGVHDVLKRSYDGLNDEQQREIFLDIASFCVGMERSEALQTLSDAFGIPLDEISFLQEQSLIEFDDQDMVRMHPLLRDMGTQIVRELSQTQAQERKYDVFVSFRGGDTRSGFTSHLHTYLQNAALTVFKDDDDVDGLQRGERISMALLKAIGLSACSVVVLSTHYANSKWCLQELENIMVCHRTKGQLVFPVFLGVHPADVRYQRKESAFGKAFESLINGKRPVEADKVQRWKTDLFEVSSFSGKTVTDSRSIGQALQYREPGFYSRICHWLMSCCIPNNESFESSTLTNEAEDIKRIVEDVTRLLDKTEMSIARHPVGVESRVKKVIEESNILKVIEESNIQGRTKDVLTIGINGMGGIGKTTIVKAIYNQIGRKFEARSFLQDIRKTWQQDNGNVSLQQRLLEDIFRGTRIEIHNIDSGKQILKDKLKGKKVFIVLDDVTDLDQLDALCGSGEWCGPGSILIITTRNNDLLKVCKHTFSEQEMKLEPAECLELFSWHAFRKPWPPEATDESLIELSEEIVKYCSRLPLALEVLGSNLFNCGIEVWNTTLERLKSIPPDGVLEKLQISYDGLRNKDEKEIFLDIVCFFIGMDRNEVIQILNSCGLDAEYGINLLKERNLVTVDKNNMLGMHDLVRDMGRAIIREQSPKLEERGRLWYHQTETETETKTKTKTKTETQFSVLKLLKIQEEEGEKLKKVTGLSLKLPTTNSFCLSEKTFKTMPKLRLLQLASVESNGKFKNLSRYLKWMSWHGFPLKHTPMDCFESDTISIELENSKLEVLWKEPPMKPINNLKILNLSHSHDLRTSPDFSWLPSLEKLVLKDCTNLYEISPTIGSLEKILRINLEGCTNLRELPRSIYKLKSLETLIISGCSRIDNLEEDVGQMESLAVLKADNTAIKQVPIEALEKLKNLGYISVLRFEGKADDVIQSIKSSSGYSSTV | 1353 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30248g00018 | 1353 | Gene3D | - | 345 | 428 | IPR042197 | - | |
Stsc30248g00018 | 1353 | Gene3D | - | 899 | 987 | IPR042197 | - | |
Stsc30248g00018 | 1353 | Gene3D | - | 4 | 174 | IPR035897 | - | |
Stsc30248g00018 | 1353 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 7 | 178 | - | - | |
Stsc30248g00018 | 1353 | Gene3D | - | 503 | 723 | IPR035897 | - | |
Stsc30248g00018 | 1353 | Gene3D | Ribonuclease Inhibitor | 1066 | 1334 | IPR032675 | - | |
Stsc30248g00018 | 1353 | Pfam | NB-ARC domain | 760 | 966 | IPR002182 | GO:0043531 | |
Stsc30248g00018 | 1353 | Pfam | NB-ARC domain | 191 | 424 | IPR002182 | GO:0043531 | |
Stsc30248g00018 | 1353 | ProSiteProfiles | TIR domain profile. | 508 | 653 | IPR000157 | GO:0007165 | |
Stsc30248g00018 | 1353 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 743 | 998 | IPR027417 | - | |
Stsc30248g00018 | 1353 | SUPERFAMILY | L domain-like | 1044 | 1329 | - | - | |
Stsc30248g00018 | 1353 | Gene3D | - | 175 | 340 | IPR027417 | - | |
Stsc30248g00018 | 1353 | Gene3D | - | 724 | 895 | IPR027417 | - | |
Stsc30248g00018 | 1353 | ProSiteProfiles | TIR domain profile. | 9 | 172 | IPR000157 | GO:0007165 | |
Stsc30248g00018 | 1353 | PRINTS | Disease resistance protein signature | 1200 | 1216 | - | - | |
Stsc30248g00018 | 1353 | PRINTS | Disease resistance protein signature | 764 | 779 | - | - | |
Stsc30248g00018 | 1353 | PRINTS | Disease resistance protein signature | 841 | 855 | - | - | |
Stsc30248g00018 | 1353 | PRINTS | Disease resistance protein signature | 938 | 952 | - | - | |
Stsc30248g00018 | 1353 | SMART | AAA_5 | 761 | 904 | IPR003593 | GO:0016887 | |
Stsc30248g00018 | 1353 | SMART | AAA_5 | 209 | 347 | IPR003593 | GO:0016887 | |
Stsc30248g00018 | 1353 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 502 | 657 | IPR035897 | - | |
Stsc30248g00018 | 1353 | SMART | till_3 | 509 | 655 | IPR000157 | GO:0007165 | |
Stsc30248g00018 | 1353 | SMART | till_3 | 10 | 150 | IPR000157 | GO:0007165 | |
Stsc30248g00018 | 1353 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 4 | 153 | IPR035897 | - | |
Stsc30248g00018 | 1353 | Pfam | TIR domain | 509 | 658 | IPR000157 | GO:0007165 | |
Stsc30248g00018 | 1353 | Pfam | TIR domain | 10 | 174 | IPR000157 | GO:0007165 | |
Stsc30248g00018 | 1353 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 177 | 439 | IPR027417 | - | |
Stsc30248g00018 | 1353 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 510 | 1324 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30248g00018 | Stsc-Chr30248 | 113180 | 123116 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30248g00018 | 188 | 511 | WRKY Transcription Factor Family | AT5G45050 | 34.756 | 1.31e-44 | 175 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30248g00018 | - | - | aip:107625711 | 1614.36 |