Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30248g00009 ATGCAGGATTTAATTCTAGTTCAACTGTCGAATTATCATAAAGTTCAGATTCTTGGGATATGGGGAATGGCAGGCATTGGTAAAACAACAATGGCCATGGCTCTTTATAACCAAATCTGTTACAGATTTGAAAGGAGGAAGTTTGTTGACAATATCAGCGAGAGAAACGATGTGACTGAACTAGACCAGCTAGAGGCTTTGTGTGGAAGGCGTGAGTGGTTTGGTCCTGGAAGCACAATAATCATCACCACGAGGGATAGGAATATACTCAAGGACGTTGATGATATATATACAGTGAAAGAAATGGATCATGATGAATCTATTGAGCTATTTTGTTGGCATGCATTCAAGAATAAGGAAATTCCTGCAGAAGATTATCGTGAACCTATCGAATGTATAGTTGAGTATTGTAGGGGAGTGCCACTTTTACTTGAAGTAGCTGGATCCCATTTATATGGAAAGATGATAGAAGAGTGGGAGAGTACATTAGAAGAGAAAGATCCTCCTCATAAATTGCAGAGGTTTCGAAGAGTGAGCTTTGACAGTTTAAGGGATGATTCACTGAAGAAGGTATTTCTTGATATAGTGTGTTTCTTTATTGGGATGAACAGGAACTATGTTGTGAAAATATTGAAAGGCACTGGATATAATTATTAG 657 0.3805 MQDLILVQLSNYHKVQILGIWGMAGIGKTTMAMALYNQICYRFERRKFVDNISERNDVTELDQLEALCGRREWFGPGSTIIITTRDRNILKDVDDIYTVKEMDHDESIELFCWHAFKNKEIPAEDYREPIECIVEYCRGVPLLLEVAGSHLYGKMIEEWESTLEEKDPPHKLQRFRRVSFDSLRDDSLKKVFLDIVCFFIGMNRNYVVKILKGTGYNY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30248g00009 218 Gene3D - 102 190 IPR042197 -
Stsc30248g00009 218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 195 IPR027417 -
Stsc30248g00009 218 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 54 IPR044974 GO:0006952
Stsc30248g00009 218 Gene3D - 2 65 IPR027417 -
Stsc30248g00009 218 PRINTS Disease resistance protein signature 17 32 - -
Stsc30248g00009 218 PRINTS Disease resistance protein signature 83 97 - -
Stsc30248g00009 218 Pfam NB-ARC domain 57 164 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30248g00009 Stsc-Chr30248 65360 66235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30248g00009 15 216 WRKY Transcription Factor Family AT5G45050 30.279 1.71e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30248g00009 - - adu:127744974 282.337