Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30246g00018 ATGATTGAAAGTAGCAGATGCTTTGGTGTTGTGACCATGTCCTCGATTGAGGAAGCTGAAACTGCAAAACAACAAATCGATGGCAATGGGAGGGATTACAATTGTGAAGTTGTGGAAAAGTCAATAGGCGAAACTTTGGGCAATTTCTTGGAAGGGGATTGGCAAAGAAGAAAAAAAAGGCTTTCTAATGAGATTGCATGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGATAAAGCCAGCAACACTCTTGAGTGGCTCTTAACAAAGTCAAAGAGAACAATTAAGGAGTTAGCTGGAAGCAAGCAACAAAGTAGTAGTGGTAATAACAATGGTGGTGGTGTTGCCAATAACATTAAGAACTTCTCTTTTTCCTCCTTTCATGAGGGCGAAGATGATGAAGTTGATTCAGTCATCAACCAACAACTCCTCATCACTGATATTGATGATATGCGAAGAAGGGAACAGAAGGAGGAAGAATTAAGGGCAAAGATGAAGGAATCAAAGGAAAAAGCAAGGGCAAGAGCAAGTGGCTACTATGAGTATGACTTCCGTGGTCCAACTCAAAGGATATGGTCTTCGCCGGCGAGGAATATGCAAAGGCAAGGAAGAAACAGAAATCCAAGGGAAGGCTATGGTCTCTTTCTAGAAAAAGTCACAAAGCCAAGAGTGGATGAGGTGAACATCGGGGCAAATCTGAATCGGAAAAGATCATAG 720 0.4153 MIESSRCFGVVTMSSIEEAETAKQQIDGNGRDYNCEVVEKSIGETLGNFLEGDWQRRKKRLSNEIACKFFDLQDMLGFDKASNTLEWLLTKSKRTIKELAGSKQQSSSGNNNGGGVANNIKNFSFSSFHEGEDDEVDSVINQQLLITDIDDMRRREQKEEELRAKMKESKEKARARASGYYEYDFRGPTQRIWSSPARNMQRQGRNRNPREGYGLFLEKVTKPRVDEVNIGANLNRKRS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30246g00018 239 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 57 185 IPR005333 GO:0003700
Stsc30246g00018 239 MobiDBLite consensus disorder prediction 194 213 - -
Stsc30246g00018 239 Coils Coil 149 176 - -
Stsc30246g00018 239 ProSiteProfiles TCP domain profile. 30 99 IPR017887 -
Stsc30246g00018 239 Pfam TCP family transcription factor 57 178 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30246g00018 Stsc-Chr30246 171979 179330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30246g00018 57 99 TCP Transcription Factor Family AT1G68800 72.093 1.47e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc30246g00018 TCP 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30246g00018 - - aip:107637396 138.272