Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30246g00017 ATGCCAGCTACCGTTGCCGCTCTACTCCGCCACTGCTCTTCCATTTCTGAGATGCGTCTCCTTCTTGCAAAGGTGATTTATGATAAGATGATTGAAAGTAGCAGATGCTTTGGTGTTGTGACCATGTCCTCGATTGAGGAAGCTGAAACTGCAAAACAACAAATCGATGGCAATGGGAGGGATTACAATTGTGAAGTTGTGGAAAAGTCAATAGGCGAAACTTTGGGCAATTTCTTGGAAGGGGATTGGCAAAGAAGAAAAAAAAGGCTTTCTAATGAGATTGCATGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGATAAAGCCAGCAACACTCTTGAGTGGCTCTTAACAAAGTCAAAGAGAACAATTAAGGAGTTAGCTGGAAGCAAGCAACAAAGTAGTAGTGGTAATAACAATGGTGGTGGTGTTGCCAATAACATTAAGAACTTCTCTTTTTCCTCCTTTCATGAGGGCGAAGATGATGAAGTTGATTCAGTCATCAACCAACAACTCCTCATCACTGATATTGATGATATGCGAAGAAGGGAACAGAAGGAGGAAGAATTAAGGGCAAAGATGAAGGAATCAAAGGAAAAAGCAAGGGCAAGAGCAAGTGGCTACTATGAGTATGACTTCCGTGGTCCAACTCAAAGGATATGGTCTTCGCCGGCGAGGAATATGCAAAGGCAAGGAAGAAACAGAAATCCAAGGGAAGGCTATGGTCTCTTTCTAGAAAAAGTCACAAAGCCAAGAGTGGATGAGGTGAACATCGGGGCAAATCTGAATCGGAAAAGATCATAG 807 0.4238 MPATVAALLRHCSSISEMRLLLAKVIYDKMIESSRCFGVVTMSSIEEAETAKQQIDGNGRDYNCEVVEKSIGETLGNFLEGDWQRRKKRLSNEIACKFFDLQDMLGFDKASNTLEWLLTKSKRTIKELAGSKQQSSSGNNNGGGVANNIKNFSFSSFHEGEDDEVDSVINQQLLITDIDDMRRREQKEEELRAKMKESKEKARARASGYYEYDFRGPTQRIWSSPARNMQRQGRNRNPREGYGLFLEKVTKPRVDEVNIGANLNRKRS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30246g00017 268 Coils Coil 178 205 - -
Stsc30246g00017 268 ProSiteProfiles TCP domain profile. 59 128 IPR017887 -
Stsc30246g00017 268 Pfam TCP family transcription factor 86 207 IPR017887 -
Stsc30246g00017 268 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 86 214 IPR005333 GO:0003700
Stsc30246g00017 268 MobiDBLite consensus disorder prediction 222 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30246g00017 Stsc-Chr30246 171979 179330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30246g00017 86 128 TCP Transcription Factor Family AT1G68800 72.093 2.81e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc30246g00017 TCP 2.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30246g00017 - - aip:107637396 138.272