Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30244g00007 ATGCTAAAAGAGTATCACTGGGATCTGCCACAGGTTACATCTCTGTTGTCCTCTCTCGAGTTCAGTATAATGGAGATCCCGGTTAAGGATGGTTCTGAAAGCCTAACAAAAGGTGCAAGTAAACCTTTTGAGGCTATTTTTGTCACATCAAAATCTAAGAAAAGTGACTCATGCAATCCACTAATCGTGATCCTTCATGGGGGACCGCACTCTGTCTCGTTATCGGGTTTTTCAAAGTCATTAGCTTTCCTTTCTTCACTTGGATATAGCTTGTTGATTGTAAATTACAGAGGCTCCATAGGATTTGGCGAGGAAGCTTTACAATCTCTTCCAGGCAAAGCTGGATCTCAGGATGTCAATGATGTACTCACTGCGGTTGATCATGTCATTAGCTTGAGACTTGCAAATCCTTCAAAGATTGCAGTGCTCGGCGGTTCACATGGTGGCTTCCTGACAACCCACTTGATTGGCCAGGCACCAGAGAAGTTTATTGCTGCAGCGGCTAGAAATCCAGTCTGTAACCTTGCACTGATGGTTGGTACATCTGATATTCCTGATTGGTGCTATGTCGAGACTTATGGAACAACGGGGAAAGATAGGTTCACCGAAGCACCATCTGCAGAGGATCTGGCTGTATTTTATAGCAAGTCTCCTATTGCACATCTCTCAAAGGTTTGGTTCATCCGCATTAGTAAAATTTTTCAAAACTATCCTTAA 717 0.4324 MLKEYHWDLPQVTSLLSSLEFSIMEIPVKDGSESLTKGASKPFEAIFVTSKSKKSDSCNPLIVILHGGPHSVSLSGFSKSLAFLSSLGYSLLIVNYRGSIGFGEEALQSLPGKAGSQDVNDVLTAVDHVISLRLANPSKIAVLGGSHGGFLTTHLIGQAPEKFIAAAARNPVCNLALMVGTSDIPDWCYVETYGTTGKDRFTEAPSAEDLAVFYSKSPIAHLSKVWFIRISKIFQNYP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30244g00007 238 Gene3D alpha/beta hydrolase 21 238 IPR029058 -
Stsc30244g00007 238 Pfam Prolyl oligopeptidase family 77 210 IPR001375 GO:0006508|GO:0008236
Stsc30244g00007 238 SUPERFAMILY alpha/beta-Hydrolases 47 225 IPR029058 -
Stsc30244g00007 238 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 9 225 - -
Stsc30244g00007 238 ProSitePatterns Prolyl endopeptidase family serine active site. 121 151 IPR002471 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30244g00007 Stsc-Chr30244 76845 80244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30244g00007 60 224 Carbohydrate Esterase AT5G36210 27.273 1.92e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30244g00007 K01303 - gmx:100803600 370.163