Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30243g00017 ATGGTTGCGGTGATACTTAATCTTGGATGCGGTACCGGGTTTCTCTCTTTGTTTTGTGCTCAGGCTGGTGCAAGGAAGTTAAACCTTGTTGAGACTGACAATTCCATGCATAAAGCTTCCAAGGAACAAAAGAGAGATTTAGCTAAAGAATGCCACGTGAGATTGCAAAGCTACTTGACACTGGTGAAGGGAATGCTCGCAATTAAGGTGGAAACTAGAATGTACCATCATCATTATCAAGGAGGGAAGAACATCCATTCTGAAAGGCACATGTTCCTTCAAGCTGCTGCTTCAAATGGGTCAGGGGGTGAGTCCAGGCTTGTGCTCTCCACATATGCCAAGCCTAGACTGAAATGGACACTAGATCTTCATGTCAGGTTCATAGAAGCAGTACATCAATGA 402 0.4428 MVAVILNLGCGTGFLSLFCAQAGARKLNLVETDNSMHKASKEQKRDLAKECHVRLQSYLTLVKGMLAIKVETRMYHHHYQGGKNIHSERHMFLQAAASNGSGGESRLVLSTYAKPRLKWTLDLHVRFIEAVHQ 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30243g00017 133 Gene3D Vaccinia Virus protein VP39 2 70 IPR029063 -
Stsc30243g00017 133 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 59 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30243g00017 Stsc-Chr30243 107119 108024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30243g00017 107 133 G2-like Transcription Factor Family AT1G69580 81.481 2.01e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30243g00017 - - gmx:100799064 82.8037