Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30242g00012 ATGGAAGATACGTTGGGTTCAACTAGTTCTTCAACAGCAATCAACTCTTCCAATATAGGATTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGAACTGGTCTAGGGGTTTCTGAGCAGGGTAGATTAGAGCCTGTAGAAACATATGTGAAGAATAATAAACGAGGTTTGGGAGCAGACAAAGCGAAGAAAAAGGCTGTCAAACCTGTTCATACTGATGATAGCTCCCAGGAAAACAATAAGCAGGAATCTAAGAAGAAAACCAAAGCACTTTCTAAACGGATTAGAAAGATGGAGGAATTTGAAAAGAAGGTGCAAGAGAAGGAATTTGAGCGTGCTTTCTTCAGGGAGTTCTGGCCAGAAAATGTATAA 372 0.4005 MEDTLGSTSSSTAINSSNIGFQLLKKHGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGADKAKKKAVKPVHTDDSSQENNKQESKKKTKALSKRIRKMEEFEKKVQEKEFERAFFREFWPENV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30242g00012 123 MobiDBLite consensus disorder prediction 54 86 - -
Stsc30242g00012 123 ProSiteProfiles G-patch domain profile. 16 62 IPR000467 GO:0003676
Stsc30242g00012 123 PANTHER BAT4 PROTEIN-RELATED 7 123 IPR039146 -
Stsc30242g00012 123 Pfam G-patch domain 17 59 IPR000467 GO:0003676
Stsc30242g00012 123 SMART G-patch_5 14 60 IPR000467 GO:0003676
Stsc30242g00012 123 MobiDBLite consensus disorder prediction 50 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30242g00012 Stsc-Chr30242 36758 38254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30242g00012 8 58 C2H2 Transcription Factor Family AT5G26610 49.020 1.87e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30242g00012 - - cam:101497292 170.629