Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30241g00012 | ATGGAGCTTAATTTGAAGCGCCAAATAGGGCTTTTTTGTGTGTTATTGATCTTACCTGCACTATGTAGTGCTGCCTTTACAAAATCCAGAGCAACTTATTATAGTACCTCTGATGGTTTAGGGACTCCAACGGGACGATGTGGATATGGCGATTATGGAAGGACCGTAGACGGTGGAAGGGTGGCAGGTGTGTCTAATCTCTGGAGGGATGGAGTTGGCTGTGGTGTGTGTTATCAGGTTAGGTGCACAAACCCATCACTGTGCAGCAGCAACGGAACCTCCTTGGTGGTAACAGACTACGGTGCCGGAGACAGAACTGATTTCGTAATGAGCCCAGCCGCCTTCTCCGGTTTGGGACTCAACTCCACCGCCACCGATCAACTCAAGAAGCTCGGCACCGTTGACATTGAGTACCAGAGAATTCCATGCTCTTACCCGGGCCAAAACATTGTCATCAAAATCAAAGAGAGCAGCACCAACCCCGGTTACTTCTCTATTGTGCTTCTCAACGTGGGTGGAACGTGTGACGTGGATGCTATCCAGGTGTCCCAATCAGGAAGCAACACGTGGATTCCGTTGCGGAGGGTTGATGGTGCGGTTTTTGATATTTCAAATCCGCCAAGTGGGTCCCTCAGTTTGAGGTTTCAAGTTGATTGCGGTTCTGGACTTGTGTGGAAGGTTCCCAAGAATGTTATCCCTGCTAACTGGAGTGCTGGTGCCACTTATGATACCGGCATTCAGTTTTAA | 747 | 0.4913 | MELNLKRQIGLFCVLLILPALCSAAFTKSRATYYSTSDGLGTPTGRCGYGDYGRTVDGGRVAGVSNLWRDGVGCGVCYQVRCTNPSLCSSNGTSLVVTDYGAGDRTDFVMSPAAFSGLGLNSTATDQLKKLGTVDIEYQRIPCSYPGQNIVIKIKESSTNPGYFSIVLLNVGGTCDVDAIQVSQSGSNTWIPLRRVDGAVFDISNPPSGSLSLRFQVDCGSGLVWKVPKNVIPANWSAGATYDTGIQF | 248 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30241g00012 | 248 | CDD | DPBB_EXLB_N | 27 | 143 | - | - | |
Stsc30241g00012 | 248 | PANTHER | EXPANSIN-B3 | 18 | 248 | - | - | |
Stsc30241g00012 | 248 | Gene3D | - | 145 | 248 | IPR036749 | - | |
Stsc30241g00012 | 248 | Pfam | Expansin C-terminal domain | 151 | 233 | IPR007117 | - | |
Stsc30241g00012 | 248 | SUPERFAMILY | Barwin-like endoglucanases | 12 | 147 | IPR036908 | - | |
Stsc30241g00012 | 248 | Gene3D | - | 20 | 144 | IPR036908 | - | |
Stsc30241g00012 | 248 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 162 | 244 | IPR007117 | - | |
Stsc30241g00012 | 248 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 44 | 148 | IPR007112 | - | |
Stsc30241g00012 | 248 | SUPERFAMILY | PHL pollen allergen | 149 | 243 | IPR036749 | - | |
Stsc30241g00012 | 248 | PRINTS | Expansin/Lol pI family signature | 64 | 82 | IPR007118 | GO:0005576 | |
Stsc30241g00012 | 248 | PRINTS | Expansin/Lol pI family signature | 131 | 147 | IPR007118 | GO:0005576 | |
Stsc30241g00012 | 248 | PRINTS | Expansin/Lol pI family signature | 230 | 244 | IPR007118 | GO:0005576 | |
Stsc30241g00012 | 248 | PRINTS | Expansin/Lol pI family signature | 25 | 40 | IPR007118 | GO:0005576 | |
Stsc30241g00012 | 248 | Pfam | Lytic transglycolase | 61 | 138 | IPR009009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30241g00012 | Stsc-Chr30241 | 103793 | 106575 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30241g00012 | 14 | 246 | Expansin Gene Family | AT4G17030 | 50.213 | 2.77e-79 | 237 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30241g00012 | - | - | gmx:100778424 | 312.383 |