Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00048 ATGGTTTCAACCAAGAACCATAACAATAATGGTGGAGTTTTAGTTGTTCCAATCAATAACAAACACGAGAAGGAAGAACAAAACAAGCAAACACAACAAGTGATGACTAAAGAAGAAGAGGAAGACAAGATTATTGACTACTCGGAAAGAGCACAGTGGCTTCGTGCCGCTGTAATGGGAGCCACGGATGGATTAGTATCAGTGGCTTCGTTAATGTTGGGTGTGGGAGCGGTTCGAACCGACGCAAAACCAATGCTACTTGCTGGTTTTGCAGGTTCAGTTGCAGGAGCTTGTAGCATGGCTATAGGTGAGTTTGTTTCTGTTTACACACAGTATGAAGTTGAACTTGCTCAAATCAAGAGGAAAATGATGAGTGGTGCTGGTTCTGAAGAAGAAGATGTGGGAATGGGAAAGAAAGTGTTACCAAATCCATTGAAAGCTGCATTGGCTTCTGCAACAAGTTATTGTTTAGGTGCAGTGGCTCCTTTGGTGGGAGCAGCGTTTATTAGAGACCACCGTACAAGGATTATGGTGGTTTTGGCTGTGGCTACTTTGGCTTTGTTTGTATTTGGTTGGATAGGCTCTGTGCTTGGAAAGACACCAATGGTTAAGTCTTGTGCTAGGGTTCTTCTTGGTGGTTGGATGGCTATGGCTATCACTTTTGGCTTAACCAAATTATTTGCTTTTACTGGTTTGCAGTAA 702 0.4288 MVSTKNHNNNGGVLVVPINNKHEKEEQNKQTQQVMTKEEEEDKIIDYSERAQWLRAAVMGATDGLVSVASLMLGVGAVRTDAKPMLLAGFAGSVAGACSMAIGEFVSVYTQYEVELAQIKRKMMSGAGSEEEDVGMGKKVLPNPLKAALASATSYCLGAVAPLVGAAFIRDHRTRIMVVLAVATLALFVFGWIGSVLGKTPMVKSCARVLLGGWMAMAITFGLTKLFAFTGLQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00048 233 MobiDBLite consensus disorder prediction 1 37 - -
Stsc30240g00048 233 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 227 IPR008217 GO:0005384|GO:0030026
Stsc30240g00048 233 MobiDBLite consensus disorder prediction 1 15 - -
Stsc30240g00048 233 Coils Coil 21 41 - -
Stsc30240g00048 233 Pfam VIT family 54 123 IPR008217 GO:0005384|GO:0030026
Stsc30240g00048 233 Pfam VIT family 138 224 IPR008217 GO:0005384|GO:0030026
Stsc30240g00048 233 CDD Nodulin-21 52 201 - -
Stsc30240g00048 233 MobiDBLite consensus disorder prediction 19 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00048 Stsc-Chr30240 194905 195854 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00048 25 232 Nodulin-like Gene Family AT3G43660 57.212 4.31e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00048 K22736 - csav:115720046 253.832