Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00045 ATGGCAGACTCAATCCAACCATTCCAATCTGCTGAATCCAACAACCATAATTCTTCAAAGGTCTTCAACATGGATCTGGAGAAGCAGAATAAAGAGCAAGAGGTACCGGTGATGATGGTAGAAACCGAGGAAGTGGAGGTTTTTGACTATACAAGGAGGGCACAGTGGCTTAGGGCTGCAGTTTTGGGTGCAAATGATGGCTTGCTATCTACAGCATCCCTCATGATGGGTGTTGGAGCCGTCAAACAAGATGTTAAGACCATGATCCTAACCGGAATCGCCGGTTTGGTGGGCGGAGCTTGTAGCATGGCCATTGGAGAGTTTGTCTCCGTTTATTCCCAATATGATATTGAGTTTGCTCAGATGAAAAGAGAAGGAAACACACAGGACAAAGACAAGCTTCCTAACCCTTATACTGCCGCCGTGGCCTCCGCCGTCGCCTTCTCTGTAGGGGCCTTGGTGCCCCTGCTAGCAGCCGCCTTCATAAAAGATTATAAGGTGAGGTTGGGGGTGGTGGTGGCGGTGGTTAGCCTTGCCTTGTTGGTGTTTGGAGGGTTGGGTGCTGTTTTAGGGAAAGCACCTTTTGTTAAGTCATCTTTGAGGGTTTTGATTGGTGGATGGTTGGCTATGGGTGTTACTTTTGGGTTAACCAAGTTGGCTGGTCACGTTGGAATTTGA 678 0.4838 MADSIQPFQSAESNNHNSSKVFNMDLEKQNKEQEVPVMMVETEEVEVFDYTRRAQWLRAAVLGANDGLLSTASLMMGVGAVKQDVKTMILTGIAGLVGGACSMAIGEFVSVYSQYDIEFAQMKREGNTQDKDKLPNPYTAAVASAVAFSVGALVPLLAAAFIKDYKVRLGVVVAVVSLALLVFGGLGAVLGKAPFVKSSLRVLIGGWLAMGVTFGLTKLAGHVGI 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00045 225 MobiDBLite consensus disorder prediction 1 21 - -
Stsc30240g00045 225 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 40 220 IPR008217 GO:0005384|GO:0030026
Stsc30240g00045 225 Pfam VIT family 122 217 IPR008217 GO:0005384|GO:0030026
Stsc30240g00045 225 Pfam VIT family 57 131 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00045 Stsc-Chr30240 180396 181312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00045 12 225 Nodulin-like Gene Family AT3G43660 67.907 1.44e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00045 K22736 - qsa:O6P43_012275 272.322