Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00042 ATGGAAGGTACTATTTCAATCATTTCTATGCGGCTTATTCGGAGGAGCATTATCTCAAAATTTATACCTGGAGGCTCTCTGGCTTTAACTTCTGCAACATTTGTATCCGCCACGACCAACCTCTTGCCAGCTATTACCTTTATCATGGCCCTTTGCATAAGGATGGAAAGATTGAATTTGGGATCAGCAGGAGGGCATGCCAAGATAATTGGAACAGTGATTGGACTTGGTGGGGCAATGCTGCTCACTTTCCTCAAAGGTCCCGAAATCCATACGCCATTCCACACTAACCTCCTTTTGCATCACAAAAACAATACTAGTACCATAGCTAGTAGTGGTGGCAGTGGCAGATGGGTGTTGGGTTCTGTGTGCGCGTTGGGGTGCGGGATCACTTATGCGTTGTGGCTGATCATACAGGGAAAGATGAGTGAGAGGTACCCAAGCTACTATTCAAGCGCTGCGCTCATGTCTCTTTGGTCGGCGCTCTTGTCAACGGTGTTTGCGCTTTCCGTTGAGAAGGACTGGAGTCAGTGGAGACTGGGTTGGAATATTAGGCTTCTCACTGTGGCTTATTCCGGCATGGTGGTTTCTGGAATGATGATGGCTGTGATGTCATGGTGCGTACACGTGAGAGGGCCCTTGTTTGTCTCTGTTTTCAGCCCTCTGGTGCTGGTGATTGTGGCCATCACTGGTTCCACCATGTTGAACGAGAATCTATACCTGGGAAGCATAATTGGAGCAGTGTTGATTGTGTGTGGCTTATACGCTGTTCTCTGGGGTAAAAGCAAAGAGATGAACAACACCAACAAGAGCCCTCATGATGATGATGGTGACACACTACAAGAAAATAATGGTGAGGAAGGAATTGAACAAGACATGAATGTGAACATACCATGA 897 0.4693 MEGTISIISMRLIRRSIISKFIPGGSLALTSATFVSATTNLLPAITFIMALCIRMERLNLGSAGGHAKIIGTVIGLGGAMLLTFLKGPEIHTPFHTNLLLHHKNNTSTIASSGGSGRWVLGSVCALGCGITYALWLIIQGKMSERYPSYYSSAALMSLWSALLSTVFALSVEKDWSQWRLGWNIRLLTVAYSGMVVSGMMMAVMSWCVHVRGPLFVSVFSPLVLVIVAITGSTMLNENLYLGSIIGAVLIVCGLYAVLWGKSKEMNNTNKSPHDDDGDTLQENNGEEGIEQDMNVNIP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00042 298 MobiDBLite consensus disorder prediction 267 298 - -
Stsc30240g00042 298 PANTHER WAT1-RELATED PROTEIN 26 269 IPR030184 GO:0016020|GO:0022857
Stsc30240g00042 298 Pfam EamA-like transporter family 121 258 IPR000620 GO:0016020
Stsc30240g00042 298 SUPERFAMILY Multidrug resistance efflux transporter EmrE 177 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00042 Stsc-Chr30240 168639 170232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00042 27 274 Nodulin-like Gene Family AT1G68170 46.512 2.83e-70 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00042 - - aip:107620100 344.354