Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00040 ATGTATGGAGGTAGGAGTAGGACGACCAATAACAGTAAGGGTACTGCTGCTGCTGCTTCCAATGGCTGCTTGCAAGGCTTGAAGCCGGTCATTGTTATGGTTATAGTTCATATTGCAATAGCCGCTGTCAATATCCTCTACAAGCTCGCCGTTAACGATGGCATGAGCCTTAGAGTCACTATCGCCTACCGCTGGATTTTCGCTACTGCTTTCGTTGCTCCCTTTGCTTTCTTTTTCGAGAGGAAGAAGAGAACAAAATTGACATGGAAGAGGAGCATTATCTCAAAATTTATACCTGGAGGCTCTCTGGCTTTAACTTCTGCAACATTTGTATCCGCCACGACCAACCTCTTGCCAGCTATTACCTTTATCATGGCCCTTTGCATAAGGATGGAAAGATTGAATTTGGGATCAGCAGGAGGGCATGCCAAGATAATTGGAACAGTGATTGGACTTGGTGGGGCAATGCTGCTCACTTTCCTCAAAGGTCCCGAAATCCATACGCCATTCCACACTAACCTCCTTTTGCATCACAAAAACAATACTAGTACCATAGCTAGTAGTGGTGGCAGTGGCAGATGGGTGTTGGGTTCTGTGTGCGCGTTGGGGTGCGGGATCACTTATGCGTTGTGGCTGATCATACAGGGAAAGATGAGTGAGAGGTACCCAAGCTACTATTCAAGCGCTGCGCTCATGTCTCTTTGGTCGGCGCTCTTGTCAACGGTGTTTGCGCTTTCCGTTGAGAAGGACTGGAGTCAGTGGAGACTGGGTTGGAATATTAGGCTTCTCACTGTGGCTTATTCCGGCATGGTGGTTTCTGGAATGATGATGGCTGTGATGTCATGGTGCGTACACGTGAGAGGGCCCTTGTTTGTCTCTGTTTTCAGCCCTCTGGTGCTGGTGATTGTGGCCATCACTGGTTCCACCATGTTGAACGAGAATCTATACCTGGGAAGCATAATTGGAGCAGTGTTGATTGTGTGTGGCTTATACGCTGTTCTCTGGGGTAAAAGCAAAGAGATGAACAACACCAACAAGAGCCCTCATGATGATGATGGTGACACACTACAAGAAAATAATGGTGAGGAAGGAATTGAACAAGACATGAATGTGAACATACCATGA 1125 0.4711 MYGGRSRTTNNSKGTAAAASNGCLQGLKPVIVMVIVHIAIAAVNILYKLAVNDGMSLRVTIAYRWIFATAFVAPFAFFFERKKRTKLTWKRSIISKFIPGGSLALTSATFVSATTNLLPAITFIMALCIRMERLNLGSAGGHAKIIGTVIGLGGAMLLTFLKGPEIHTPFHTNLLLHHKNNTSTIASSGGSGRWVLGSVCALGCGITYALWLIIQGKMSERYPSYYSSAALMSLWSALLSTVFALSVEKDWSQWRLGWNIRLLTVAYSGMVVSGMMMAVMSWCVHVRGPLFVSVFSPLVLVIVAITGSTMLNENLYLGSIIGAVLIVCGLYAVLWGKSKEMNNTNKSPHDDDGDTLQENNGEEGIEQDMNVNIP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00040 374 Pfam EamA-like transporter family 197 334 IPR000620 GO:0016020
Stsc30240g00040 374 PANTHER WAT1-RELATED PROTEIN 28 345 IPR030184 GO:0016020|GO:0022857
Stsc30240g00040 374 MobiDBLite consensus disorder prediction 343 374 - -
Stsc30240g00040 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00040 Stsc-Chr30240 168639 170232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00040 25 350 Nodulin-like Gene Family AT1G68170 43.804 7.91e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00040 - - aip:107620100 422.55