Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00039 ATGGGCAACCTCTTGCCAGCTCTTACCTTTATCATGGCAGTTTGCGTAGGGATGGAAAGATTGAATTTGGGATCAGCAGAAGGGCATGCCAAGATAATTGGAACAGTCATTGGACTTGGTGGGGCAATGCTGCTCACTTTCCTCAAAGGTCCAGAAATCCATACGCCATTCCACACAAACCTTTTGCATAACAAAAACAGTACTTCCAGAGCAAGCAGTGGCGGCGGCGGTGGTAGAAGGGTGTTGGGTTCTGTGTGCGCGTTGGGGAGCGGGATCTGTTATGCCTTGTGGCTCATCATACATGGAAAGATGAGTGAGAGGTATCCAACCTACTATTCAAGCACTGCTCTCATGTCTCTTTGGATGGCGCTCTTGTCCACCGTGTTTGCTGTTTCGGTTGAGAAGGATTGGAGTCAGTGGAGACTGGATTGGAACATTAGGCTTCTCACTGTGGCTTATTCTGGCATGGTGGTTTCCGGAATGATGGTGGCTGTGATATCGTGGTGCGTACACGTGAGAGGGCCGTTGTTTGCGTCTGTCTTCAGCCCTCTGGTGCTGGTGATTGTGGCCATGGCTGGTTCCACCATGTTGAATGAGAATCTATACCTCGGAAGCATAATTGGAGCAGTGTTGATTGTGTGTGGGTTATATGCTGTTCTGTGGGGTAAAAGCAAAGAGATGAACAACACCAAGAAGAGCCCTCATGATGATGATGATGATGGTGATGACACAGTAGAAGTAATTACTGTGACAAGCTCTAACGCGGTCAGGGATAACCAAGATTCAACAGAGGATCATGGTAATGGGGAATGA 813 0.4822 MGNLLPALTFIMAVCVGMERLNLGSAEGHAKIIGTVIGLGGAMLLTFLKGPEIHTPFHTNLLHNKNSTSRASSGGGGGRRVLGSVCALGSGICYALWLIIHGKMSERYPTYYSSTALMSLWMALLSTVFAVSVEKDWSQWRLDWNIRLLTVAYSGMVVSGMMVAVISWCVHVRGPLFASVFSPLVLVIVAMAGSTMLNENLYLGSIIGAVLIVCGLYAVLWGKSKEMNNTKKSPHDDDDDGDDTVEVITVTSSNAVRDNQDSTEDHGNGE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00039 270 Pfam EamA-like transporter family 83 220 IPR000620 GO:0016020
Stsc30240g00039 270 PANTHER WAT1-RELATED PROTEIN 1 232 IPR030184 GO:0016020|GO:0022857
Stsc30240g00039 270 SUPERFAMILY Multidrug resistance efflux transporter EmrE 137 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00039 Stsc-Chr30240 165920 167058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00039 2 259 Nodulin-like Gene Family AT1G68170 41.699 1.36e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00039 - - aip:107620100 352.829