Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00037 ATGGCTAACCTCATACCAGCTCTTACCTTTATCATGGCCGTTTGCATTGGGATGGAAAGATTGAACCTGGGATCAGCAGCAGGGCAGGCCAAGATAATTGGAACCATCACCGGAATTGCTGGAGCAATGGTGCTCACTTTCGTCAAAGGTCCTGAAATCCATACGCCAACTCACGTTAACCTTCTGCATCCCAAAAACAACACTACTATAGCAGCTAGTAACGGCGGTGGCGGTGATAGAAGGGTGTTGGGTTCAGTGTGCGCGTTAGGAGGTGGAATATGTTATGCACTGTGGTTGATCATACAGACGAAGATGAGTGAGAAGTACCCAAGCTATTACTCAAGCACTGCGCTCATGTCTCTTTGGGCGGCGCTCTTGTCCACGGTGTTCGCTGTTTCCGTTGAGAAGGATTGGAGTCAGTGGAAACTGGGTTGGAACATTAGGCTTCTCACTGTGGCTTATTCCGGCATGGTGGTTTCCGGAATGATGGTGGCTGTGATATCGTGGTGCGTGCGCATGAGAGGGCCGTTGTTTGCGTCTGTTTTCAGCCCTCTGATGCTGGTGATTATCGCCATCGCTGGATGCACTATCTTGAACGAGAAGCTACACGTTGGGAGCATTGTTGGAGCGGTTTTGATTGTGTGTGGGTTGTACGCTGTTCTTTGGGGTAAAAGCAAAGAGATGAAGAACACCAAGAAGACGACAATGAGTGAATTACCACAATGCCCTCATCACGATGATGACACGGTTCAAGTAATTGTGACGAGGTCTAATTCTAAAGCTGAAGAAGATCGTAGTAATAATAGCAACAACAATGAACAACATCATAATAATAGTAGTAGTAATAATAATGCGGCTAATAATAATGTGGTTAGGGATAATAACCAAGATTCATCAGAGGAGCATGGTAATAATAATAATAATGATAATAATAATAATAGGGTAATAGCAAGAGATGAAGAAGAAGGAGAAAAAGAACATGATGATGACGACGAAGAGGGAGTTTGTCCGAATGCAGAAGACATAATACCTAGTGTAGTAATATGA 1047 0.4432 MANLIPALTFIMAVCIGMERLNLGSAAGQAKIIGTITGIAGAMVLTFVKGPEIHTPTHVNLLHPKNNTTIAASNGGGGDRRVLGSVCALGGGICYALWLIIQTKMSEKYPSYYSSTALMSLWAALLSTVFAVSVEKDWSQWKLGWNIRLLTVAYSGMVVSGMMVAVISWCVRMRGPLFASVFSPLMLVIIAIAGCTILNEKLHVGSIVGAVLIVCGLYAVLWGKSKEMKNTKKTTMSELPQCPHHDDDTVQVIVTRSNSKAEEDRSNNSNNNEQHHNNSSSNNNAANNNVVRDNNQDSSEEHGNNNNNDNNNNRVIARDEEEGEKEHDDDDEEGVCPNAEDIIPSVVI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00037 348 MobiDBLite consensus disorder prediction 323 337 - -
Stsc30240g00037 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 124 226 - -
Stsc30240g00037 348 PANTHER WAT1-RELATED PROTEIN 1 233 IPR030184 GO:0016020|GO:0022857
Stsc30240g00037 348 MobiDBLite consensus disorder prediction 271 313 - -
Stsc30240g00037 348 MobiDBLite consensus disorder prediction 257 348 - -
Stsc30240g00037 348 Pfam EamA-like transporter family 84 221 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00037 Stsc-Chr30240 152981 155781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00037 4 235 Nodulin-like Gene Family AT1G68170 44.444 1.09e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00037 - - aip:107620100 425.246