Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00036 ATGAAGAATAATATGTTGAAGGTGGTGGAAGTGTTGAAGCCGGTGGTGCTGATGGTGGTTGTTCAGATAGCAAATGCATGGGTGAATGTTCTGTACAAGCTTGCTGTGAACGATGGCATGAGTCTCAGAGTGGTTGTTGCTTATCGCTATATCTTCGCTACTGCTTTCATTGCTCCTCTTGCTTATATTCTCGAGAGGAAGACAAGGACTAAGATGACTTGGACAATTCTCTTTCAATCATTCTTGTGCGGTTTATTTGGGGGAGCATTGCCTCAGAACCTACAAATGGAAGCACTTGCTTTAACTTCTGTCACATTTGCAACTGCCATATCCAACCTTGTTCCAGCCATCACCTTCATCTTGTCCCTCTCCTTCGGAATGGAGAGATTGAATCTGAGAAAAGCAGCAGGGAAGGCAAAGATAATAGGAACATTGACTGGAATTGGGGGTGCAATGTTGATGACATTTTATAGAGGCGTCCAAGTTAACATCTTATCCTTCCACATTAACCTCTTCAATAATAATAATAATCACCCAAAGTCACACGGTGGTGGTGGTGGTGGAGGGTTGTTCTTGCTGGGTGCTCTGTCTTCCTTCTCAAGCAACGCCTCTTATGCATTGTGGCTCATCATTCAAGCCAAGATGAGCAGAGCATATCCATATCCATATTCAAGCACTGCCCTCATGTGTGTAATGGGAGCAATCTTATCTGTTACCTTCACCTTTTGTCTTGAGAGGGATTTGACTCAGTGGAAGTTGGGTTGGAATGTTAGGCTACTCACTGTAGCTTATGCGGGTATAGTGGTTTCGGGAATAATGGTGGCTGTGATATCATGGTGCGTACGCATGAGAGGTCCATTGTTTGTCTCTGTTTTTAGCCCTCTCATGCTAGTGGTTGTTGCCTTTGCTGGATCCACCATTCTTGATGAGAACCTATACCTTGGAAGCATAATTGGATCAGTGCTGATTGTGTGCGGGTTATACCTGGTTCTATGGGGGAAAAGCAAAGAGATGGTGAAGAATCAGTTAGTGCCATCAAAAAGTGACAAACTGGAAATAGTGGTCAAATCTCAAGATTCATTAAAAAACGGAGGTGAAGACCGTGTTACACTTACACACATGCACCACGATTGCACGGAAAAAGAAGGAGAACAAAATTAA 1161 0.435 MKNNMLKVVEVLKPVVLMVVVQIANAWVNVLYKLAVNDGMSLRVVVAYRYIFATAFIAPLAYILERKTRTKMTWTILFQSFLCGLFGGALPQNLQMEALALTSVTFATAISNLVPAITFILSLSFGMERLNLRKAAGKAKIIGTLTGIGGAMLMTFYRGVQVNILSFHINLFNNNNNHPKSHGGGGGGGLFLLGALSSFSSNASYALWLIIQAKMSRAYPYPYSSTALMCVMGAILSVTFTFCLERDLTQWKLGWNVRLLTVAYAGIVVSGIMVAVISWCVRMRGPLFVSVFSPLMLVVVAFAGSTILDENLYLGSIIGSVLIVCGLYLVLWGKSKEMVKNQLVPSKSDKLEIVVKSQDSLKNGGEDRVTLTHMHHDCTEKEGEQN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00036 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 143 - -
Stsc30240g00036 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 335 - -
Stsc30240g00036 386 PANTHER WAT1-RELATED PROTEIN 13 345 IPR030184 GO:0016020|GO:0022857
Stsc30240g00036 386 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Stsc30240g00036 386 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00036 Stsc-Chr30240 145838 149076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00036 12 359 Nodulin-like Gene Family AT1G68170 45.977 8.25e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00036 - - gmx:100788378 498.819