Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00034 ATGATACTATTCAAGATGAAGGGTGTGTCGAATGTATTGAGCGGGTTGAGACCGGTGATACTTATGGTGTTGGTGCAGGTTGCATTTACTGCTGTGAATGTGTTCTACAAGCTTGCCATCAATGATGGAATGAGTGTTAAAGTTCTTACTGCTTATCGTCTTGCTTTTGGTGCTGCTTTCACTGTTCCTCTTGCTCTCTTTTCTGAAAGGAATAAGAGACCAAAGATGACTTGGAGGGTGCTTTTCATGTCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTGTTTCAGAACCTTTTCTATGGTGCACTGGCTTTGACATCAGCAACTTATGTGTCTGCCATCTACAACCTGGTTCCAGGCATCACTTTTGTGTTGGCCATAACCTTCGGTTTTGAGAAATTGAAACTGGGGGAAGCAGCAGGGAAGGCCAAGGTGTTTGGAACTTTGATTGGAATTGGTGGGGCTATGGTGTTGACCTTTCTCAAAGGGATGCAAATTAATATATGGCCATTCCATGTCAACCTTTTGAAGAACAATAATCCATCATCACAACATCACCATAGTAATGACTTGTTGGGGGTTGTGTGCGCCATAGCTAGCTGCTTCTCTTATGCTTCCTGGCTCATCATTCAGGCTAAGATGACCAAGGAATACCCAAGTCACAACTCAAGCATAGCTTTGATGCTTACTGCAGCAGCAATTCAAGCCACTGTTTATGCTTTTTGTAGTGAGAGGGATCTCTCTCAATGGAAGCTTGGTTGGAATATCAGGCTATTGGCTTCTGCTTATTCGGGAATTGTGGGGTCTGGAGTAGTGTTTCTTATGATAGCATGGTGCATACAAATGAGAGGGCCACTATTTGCCTCCATTTTCAATCCTCTTATGCTTGTGCTTGTGGCTGTTGCGGCTTCTTTGATGTTGGATGAACAATTATATCTGGGAAGTGTGATTGGATCAGTGATGATAGTGTGTGGACTATACGCGGTTCTATGGGGGAAGAACAAAGAGATGAAAAAGGTAGCACAGTTGGTGCCATCTGAAATCATCCAGCAAGAGGATCAAGCTATACAAGTTGTTGTTACATCCACGCCAGTTGTCATAAACCATGACAAATGTGATAACCAACAACAGTAA 1134 0.4312 MILFKMKGVSNVLSGLRPVILMVLVQVAFTAVNVFYKLAINDGMSVKVLTAYRLAFGAAFTVPLALFSERNKRPKMTWRVLFMSFLCGLFGGSLFQNLFYGALALTSATYVSAIYNLVPGITFVLAITFGFEKLKLGEAAGKAKVFGTLIGIGGAMVLTFLKGMQINIWPFHVNLLKNNNPSSQHHHSNDLLGVVCAIASCFSYASWLIIQAKMTKEYPSHNSSIALMLTAAAIQATVYAFCSERDLSQWKLGWNIRLLASAYSGIVGSGVVFLMIAWCIQMRGPLFASIFNPLMLVLVAVAASLMLDEQLYLGSVIGSVMIVCGLYAVLWGKNKEMKKVAQLVPSEIIQQEDQAIQVVVTSTPVVINHDKCDNQQQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00034 377 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Stsc30240g00034 377 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Stsc30240g00034 377 PANTHER WAT1-RELATED PROTEIN 18 342 IPR030184 GO:0016020|GO:0022857
Stsc30240g00034 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Stsc30240g00034 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00034 Stsc-Chr30240 127916 129586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00034 16 354 Nodulin-like Gene Family AT1G25270 42.398 1.14e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00034 - - gmx:100798755 529.635