Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00033 ATGAAGGGTGCGGCGAATGTATTGCACGGGTTGAAACCAGTGATGCTTATGGTGTTGGTGCAGGTTTCATTTACTTTTGTGAGTGTCTTCTACAAGCTTGCTATCAACGATGGAATGAGTGTTAAGATTCTTACTGCTTATCGTCTTGCTTTTGCTGCTGCTTTCACGGTTGTTGTTGCTCTCTTTTCTGAAAGGGGAAGTTTGTTTCAGAACCTTTTCTATGGTGCACTGGCTTTGACATCAGCAACTTATGTGTCTGCCATCTACAACCTGATATCAGGCATCACCTTTGTGTTGGCCATAGCCTTCGGTTTTGAGAAATTGAAACTGGGGGAAGCAGCAGGGAAGGCCAAGGTGTTTGGAACTTTGATTGGAATTGGTGGGGCTATGGTCATGACCTTTGTTAAAGGGCTGCAAATTAATATGCCATTACATGTCAACCTTTTGAAGAACAATAATCCATCATCACAGCATCACCATAGTAATGACTTGTTGGGGGTTGTGTGCGCCTTAGTTAGCTGCTTCTCTTATGCATTCTGGATTATCATTCAGGCTAAGATGACCATGGAATATCCAAGTCAAAACTCAAGCACAGCTTTGATGCTTATATCAGCAGCAATTCAAGCCACTGTTTATGCTTTTTGTAGTGAGAGGGATCTCTCTCAATGGAAGCTTGGTTGGAATATCAGGCTATTGGCTTCAGTTTTTTCGGGAATTGTGGGGTCTGGAGTGGTGTATCTTATCTTATCATGGTCCATAAAAATGAGAGGGCCATTATTTGCCTCCATTTTCAACCCTCTCATGCTTGTGCTAGTGGCTGTTGTGGCTTCTTTCATGTTGGATGAGCAATTATATCTGGGAAGTGTGATTGGATCAGCGATAATAGTGTGTGGACTATATGCGGTTCTATGGGGAAAGAACAAAGAGATGAAAAAGGTAGCTCAGTTGCAGCAGCAGCAAGAGGATCAAGCCACTCCAGGTGTCATAAACCATGACAAATGTGATCAACAACAATAA 1017 0.4267 MKGAANVLHGLKPVMLMVLVQVSFTFVSVFYKLAINDGMSVKILTAYRLAFAAAFTVVVALFSERGSLFQNLFYGALALTSATYVSAIYNLISGITFVLAIAFGFEKLKLGEAAGKAKVFGTLIGIGGAMVMTFVKGLQINMPLHVNLLKNNNPSSQHHHSNDLLGVVCALVSCFSYAFWIIIQAKMTMEYPSQNSSTALMLISAAIQATVYAFCSERDLSQWKLGWNIRLLASVFSGIVGSGVVYLILSWSIKMRGPLFASIFNPLMLVLVAVVASFMLDEQLYLGSVIGSAIIVCGLYAVLWGKNKEMKKVAQLQQQQEDQATPGVINHDKCDQQQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00033 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 308 - -
Stsc30240g00033 338 PANTHER WAT1-RELATED PROTEIN 12 317 IPR030184 GO:0016020|GO:0022857
Stsc30240g00033 338 Pfam EamA-like transporter family 165 303 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00033 Stsc-Chr30240 124975 126394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00033 1 325 Nodulin-like Gene Family AT1G68170 38.177 2.03e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00033 - - gmx:100798755 401.749