Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00028 ATGAATTTGGAGACCATATCCAGAAAGTTCATAAAGCCATCATCACCAACACCTCCAAACCTTGAAATCTTCAACATGTCCCTTCTAGACCAGCTTTCCCCTAACATCCATGGCAACATGACCCTCTTCTACCCTCACAAAACACCTGCACAACAATTCTCCGTCAAATCTCAACTTCTTCAGGACTCACTCTCTCAAATCTTGACGCTCTTCTACCCTCTCGCCGGCCGCCTCAGAGACGCCGCCACCATCCACTGCAACGATCTAGGAGCTTTCTTCATCCAATCACGAACCAACACCACTCTCTCAGAAATCATCTCTCCTCCTAACTTGAACATCATCCAGAATCTTCTCCCCACCGCCGACTCTGAAACCATGCAACTCTCCAACTCCTCCATGCTGCTTGTCCGCTTCACCTTGTTCGGTTGCGGCGCCACCGCCATCACCATCTCCCTCACTCACAAGATCGCTGACTTCGCAGCCTTGATCACTATCCTCAAGGCATGGACCGCCGCCTGCATCGCCGGAGACACCCAACCGGTTGTCCCCGAACTCGCCGTCGGATCTGCTCTCTTCCCTCCGAGCGAGACTCTCCCCGCCGGGATGTCAGCCTCCGTGAACATCCCGGCGGAGAAGTTCACGACAACGAGGCTCATTTTCGAGTCGTCCAAGATACAAGAGCTGAAGAAGAAGGTGAGGCTTGAATTTGAACCGTCGAGGGTTGAGGTGGTGCTTGCTCTCATTTGGCGATGCGCATTGTTATCTAAAACGACAGCGTTTAAAGCTTCAGCGTTGTTCCAGGCAGTGAACCTTCGACCACGAATGGAACCTCGTGTTCCAGAGACGGCGATAGGGAACTTTGTATGGCCATTCGCAGTTACCGTGGAGGAGGAGTACGAATTAGAGCTTGAGGTATTAGTAAAGAAGATGAGAGATTCATTGAAGGATTTCATGGAGAGTAAAGTTGAAAGGTTGAAGAATTCAGACGAAGTGATGGAGGGTTTGAAGGAGAGGGGTGAGATGTTGAAGAAGAAGAGAATTAGTTTGGTTTATAAGTGTTCGAGTTGGTGTAAGATTGGATATTCAATTTATGAGGTTGATTTTGGGTGGGGGAAGCCAGTTTGGATGTGTAGCATCAACAACATAGTGAGTAACACCATTGCTTTCATGGATACAAGGGATGGCCATGGTGTTGAAGCTTTTGTCACCTTGGATCATCAACACATGCATTCTTTTCAGGAGTCTCAACAACTCTTGCATTATGCTTTGATTAATCCCCCTCTTCTTCTCTGA 1293 0.4857 MNLETISRKFIKPSSPTPPNLEIFNMSLLDQLSPNIHGNMTLFYPHKTPAQQFSVKSQLLQDSLSQILTLFYPLAGRLRDAATIHCNDLGAFFIQSRTNTTLSEIISPPNLNIIQNLLPTADSETMQLSNSSMLLVRFTLFGCGATAITISLTHKIADFAALITILKAWTAACIAGDTQPVVPELAVGSALFPPSETLPAGMSASVNIPAEKFTTTRLIFESSKIQELKKKVRLEFEPSRVEVVLALIWRCALLSKTTAFKASALFQAVNLRPRMEPRVPETAIGNFVWPFAVTVEEEYELELEVLVKKMRDSLKDFMESKVERLKNSDEVMEGLKERGEMLKKKRISLVYKCSSWCKIGYSIYEVDFGWGKPVWMCSINNIVSNTIAFMDTRDGHGVEAFVTLDHQHMHSFQESQQLLHYALINPPLLL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00028 430 Gene3D - 210 422 IPR023213 -
Stsc30240g00028 430 Coils Coil 318 338 - -
Stsc30240g00028 430 PANTHER F21J9.9 4 421 - -
Stsc30240g00028 430 Pfam Transferase family 1 418 - -
Stsc30240g00028 430 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00028 Stsc-Chr30240 101148 102629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00028 1 414 Monolignol Biosynthesis Gene Families AT5G48930 24.889 7.34e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00028 - - aip:107620102 605.905