Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00027 ATGGCGTCGCCCAAGGTTGTCACCACTCATCCCGATCTGCCACGTGACTCATCCATCTGTTCCATTTCCACCCTGCTTGCAGAAGATGAAGAAGGAGGAGGAGGTTCCAATAACAAGGTGGCCATGGAAGACTTTCTGAACTCTATATACTCGTCGAATGAGATGGATCAAGTGTGGAAGGACATGGTGGGAGGAGCGAGCACTGAAGAGAAAGAGAAAGAGGTGACATTGGAGGATTACCTGAGAAGGGGAAAGAGGAAGGGTGGCGTTAGTGCGGAGGAGGTTGACAAGGCCACCCTTCAGAAGCAGAGGAGGATGATCAAGAACAGAGAGTCTGCTGCTAGGTCCAGGGAACGCAAGCAGGCTTACACTCTTGAATTAGAGTCTTTGGTTCTTCAACTCGAGGCTGAGAATGCTCGATTATTACAAGAACAGGAACAAATCAAGAAGCAGAGGTACAACCAGCTCATGGAGAGTATCATTCCAGTTGTTGAAAAGCGTAAAGCAAGACCAATGCTTCGCAGACTCAATTCACTCCAATGGTGA 546 0.4853 MASPKVVTTHPDLPRDSSICSISTLLAEDEEGGGGSNNKVAMEDFLNSIYSSNEMDQVWKDMVGGASTEEKEKEVTLEDYLRRGKRKGGVSAEEVDKATLQKQRRMIKNRESAARSRERKQAYTLELESLVLQLEAENARLLQEQEQIKKQRYNQLMESIIPVVEKRKARPMLRRLNSLQW 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00027 181 Coils Coil 120 154 - -
Stsc30240g00027 181 PRINTS cAMP response element binding (CREB) protein signature 134 151 - -
Stsc30240g00027 181 PRINTS cAMP response element binding (CREB) protein signature 114 134 - -
Stsc30240g00027 181 PRINTS cAMP response element binding (CREB) protein signature 96 112 - -
Stsc30240g00027 181 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 86 162 IPR043452 GO:0003700|GO:0045893
Stsc30240g00027 181 SMART brlzneu 97 161 IPR004827 GO:0003700|GO:0006355
Stsc30240g00027 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 151 IPR004827 GO:0003700|GO:0006355
Stsc30240g00027 181 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 100 162 - -
Stsc30240g00027 181 Gene3D - 100 156 - -
Stsc30240g00027 181 SUPERFAMILY Leucine zipper domain 101 153 IPR046347 GO:0003700|GO:0006355
Stsc30240g00027 181 Pfam bZIP transcription factor 98 157 IPR004827 GO:0003700|GO:0006355
Stsc30240g00027 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Stsc30240g00027 181 CDD bZIP_plant_BZIP46 101 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00027 Stsc-Chr30240 100122 100822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00027 83 181 bZIP Transcription Factor Family AT5G44080 61.386 1.25e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc30240g00027 bZIP_1 4e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00027 K14432 - cave:132166742 154.066