Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30240g00009 ATGGGGAAGCAGGAACAAGAGCAGTACCTGCAGCAGCAGCAGAGGAATAACGCTCAACAACAACAATCACTCTCATCGGGAATCGTGTGCCATGGATGCTCCTTGCTTCTCGGAGCCATCAGTTTCAAGTGCCTCTTCGTTCTCATACTCAGTCTCTCCGCTCTTCTTTCTGGAATCTTCTGGATTCTTCCCAATTACGCTCACAAACTCAGCTACGATGCCAAAGATCAAATTAAGAACAGCGCTTCCGTTCAAGCTTCCTTCAGACTGGACAAACCCATCTCAGAACTTCTTCCGTACATTCAAAGATTAGAATATGATATATATGGCGAAATAGGTCTTCCAAATACAAAGGTGGCTGTCCTATCCATGCACCAAAGTGTTCAACCTAACTGGACTGACGTGGTTTTCGGTGTTCTTGCTGTTCCAATGAATGTTTCAATAGATCCAGTGCTCTTGAGTGTGCTGAGATCATCGTTTCTTGATCTGTTCCTCCAGAAAATCAATCTGACTCTGACAAAATCGATATTTGGGAATGCATGTACATTTGAGATATTGAAGTTTTCTGGGGGGTTGACTGTAATACCAGTGCAGTCAGCTTCTATTTGGCAGAAACCTGAGGTTCTGTTTAATTTTACTCTTTATAACTCGACATCAGAAGTGCTGAATAATATTGATGACTTGAAGTATGAATTGAAGTCTGGATTGCATCTGAAGTCAAATGAGAATGTGTTTGTTCAAATAACAAGTGTAAAGGGTTCAACGGTAGCTCCTCCAGTAACAGTGCAGGCTTCAGTCATGCCAGGCTTTGGGAGTCTCCTACCTGAAAGATTGAAACAATTAGCTGAAATATTAAAAGGCCCTGCTGCAAAAAATCTTGGCCTTGATAACTCAATCTTTGGCAATGTCAAACAAATCATGTTATCTTCTTTTTTAAGGGATACATTGCATGCAACCTCACCTTCTCCTTCCCCTGCTCCATCACCATCAATTTCACCGGAAGTTGCTCCTTCTCGCCCTCCAATCTCCTCACCAACTGTTAAGCAACCTCCTTGTTTTGACTGTGAAGTTTCTGCACCTGCATCAGCTCCTGCACCTGCACCTTCTGCTATCACTATACTTCCTCCAGACCCGTGTCCATATAGTGAATTATATCCTTCAAGACCTTCACGAAAGTATTATTCTAAACCTTCCTTTTCCCGATATTATTCTCCTCCTGCTCCTCCTCCTACCTCACATAGAGCAAGCCACAACGCCGACAAAGTCCCAGACGTGTCACCTGAAGACCAGGTGTCCCGTGGCTCCAAGCTTCTGCAGCGTGAAGTAATATCTAAAAGATTGGTGTCTCATTCACTTGCTCCATCCTCAATATGTAAGTTTATCTGGACTGATAGATCCTTCTTTTGA 1407 0.4321 MGKQEQEQYLQQQQRNNAQQQQSLSSGIVCHGCSLLLGAISFKCLFVLILSLSALLSGIFWILPNYAHKLSYDAKDQIKNSASVQASFRLDKPISELLPYIQRLEYDIYGEIGLPNTKVAVLSMHQSVQPNWTDVVFGVLAVPMNVSIDPVLLSVLRSSFLDLFLQKINLTLTKSIFGNACTFEILKFSGGLTVIPVQSASIWQKPEVLFNFTLYNSTSEVLNNIDDLKYELKSGLHLKSNENVFVQITSVKGSTVAPPVTVQASVMPGFGSLLPERLKQLAEILKGPAAKNLGLDNSIFGNVKQIMLSSFLRDTLHATSPSPSPAPSPSISPEVAPSRPPISSPTVKQPPCFDCEVSAPASAPAPAPSAITILPPDPCPYSELYPSRPSRKYYSKPSFSRYYSPPAPPPTSHRASHNADKVPDVSPEDQVSRGSKLLQREVISKRLVSHSLAPSSICKFIWTDRSFF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30240g00009 468 MobiDBLite consensus disorder prediction 322 347 - -
Stsc30240g00009 468 MobiDBLite consensus disorder prediction 402 434 - -
Stsc30240g00009 468 Coils Coil 3 23 - -
Stsc30240g00009 468 PANTHER F20B24.21 1 456 - -
Stsc30240g00009 468 MobiDBLite consensus disorder prediction 317 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30240g00009 Stsc-Chr30240 22588 25506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30240g00009 1 312 C3H Transcription Factor Family AT3G10810 38.978 2.37e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30240g00009 - - ccaj:109803451 502.671