Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30239g00008 ATGATACAGCATAACCCCATCGAGGTTGACGAGGCTTACGTCCCAAAGGTTGGAATGTGGTTTGAAAGCGTCGAGGATGCTGGACTATTTTACAAAGAGTATGCCAAACGAGTAGGTTTCTCTACAAAGATAAGGAATTCAAATAGATGTAAGAATACCAAGGAAATAAAGAACCAACTCATCACTTGTACTAGAGAAGGGAGGTGGACATCGGAGGTTCCTTCCTTAGAGAAGATGAACCCGATACGTGGTGCAAATTGTCCAGCACGAATTTATGTTCACATAGACAAGAAGGGTCGACTTTGGTGCTTTGGATAA 318 0.4245 MIQHNPIEVDEAYVPKVGMWFESVEDAGLFYKEYAKRVGFSTKIRNSNRCKNTKEIKNQLITCTREGRWTSEVPSLEKMNPIRGANCPARIYVHIDKKGRLWCFG 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30239g00008 105 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 100 - -
Stsc30239g00008 105 Pfam FAR1 DNA-binding domain 30 101 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30239g00008 Stsc-Chr30239 71245 71562 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30239g00008 FAR1 8.5e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30239g00008 - K17604 adu:110280446 115.161