Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30238g00039 ATGTCGGGGCAAACACAGCGTTTGAATGTTGTCCCCACGGTGACGATGCTGGGAGTGATGAAGGCTCGTTTGGTTGGAGCCACGCGTGGCCATGCTCTCCTAAAGAAGAAGAGCGATGCGCTTACTGTGCAGTTTAGGCAGATCCTGAAGAAGATTGTGTCTACCAAGGAATCAATGGGGGACATCATGAAGACCTCTTCTTTTGCACTGACCGAGGCAAAGTATGTTGCTGGTGACAACATCAAGCATGTTGTGCTTGAGAATGTTCGAGAGGCCTCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGTGTTAAGCTTCCCAAGTTCGAGTACACCAATGATGGTGAGGTTAACAAGAATGACCTCACTGGATTGGCCCGAGGTGGCCAGCAGGTGCAGCAGTGCCGAGCTGCTTACATCAAGGCAATTGAGGTCCTTGTGGAGCTTGCCTCTCTTCAGACATCCTTCCTCACACTAGACGAGGCGATCAAGACCACGAACCGGAGGGTTAATGCCCTTGAGAATGTGGTGAAGCCTAGGTTGGAGAATACCATTAGTTACATTAAGGGAGAGTTAGATGAGCTAGAAAGGGAGGATTTCTTTAGGTTGAAGAAGATCCAAGGATACAAGAAGAGGGAAATTGAGAAGCAGATGCAATCTGCCAAGTTGTTCGCTGAGGAACAGGTTGCTGAGAAGCTTGCATTGCAGAGAGGTATTTCGCTGAATAATGCTCAAAACATTTTGTCTGCAGCGTCCCAGAAAGACGAGGATATCATTTTCTGA 789 0.4892 MSGQTQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVNKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQSAKLFAEEQVAEKLALQRGISLNNAQNILSAASQKDEDIIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30238g00039 262 Gene3D - 1 199 - -
Stsc30238g00039 262 Pfam ATP synthase subunit D 17 209 IPR002699 GO:0046961
Stsc30238g00039 262 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Stsc30238g00039 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
Stsc30238g00039 262 FunFam V-type proton ATPase subunit D 1 199 - -
Stsc30238g00039 262 Coils Coil 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30238g00039 Stsc-Chr30238 204755 206698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30238g00039 1 262 Primary Pumps ATPases(2) AT3G58730 81.298 6.11e-159 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30238g00039 K02149 - tcc:18612121 451.44