Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30238g00033 ATGCCTGCCATTGCCGTCGTCGACGCCTCATCAGCTTCCGGCCAAACGGTTTGTGTCACCGGTGCCGGCGGCTTCATAGCGTCTTGGCTTGTGAAGCTTCTGTTGGAGAAAGGCTACACCGTCAAAGGAACACTAAGAAACCCAGATGATCCGAAGAATCAGCACCTGAGAGAGTTGGAAGGAGCAAAAGAAAGGTTAACTCTGCATAAGGTTGATCTTCTTGATTTTGAATCCGTTAAGTCTGTTTTCAATGGCTGCCATGGAGTCTTCCACACAGCTTCTCCGGTCACTGACAACCCTGAAGAGATGGTGGAACCAGCAGTGAATGGAACAAAGACTGTGATAATGGCAGCTGCAGAAGCAAAAGTGAGGCGCGTGATTTTCACTTCCTCAATTGGAACAGTTTATATGGACCCCAAAACCAGCAGGGATCAAATTGTTGATGAATCTTCTTGGAGTGATTTGGAGTATTGCAAGAGCACTAAGAACTGGTATTGCTATGGGAAGACAGTGGCTGAACAAACAGCATGGGAAATATCAAAAGAGAAAGGTGTTGACCTAATTGTGGTGAACCCAGTTTTGGCTTATGTCCATGTTAAGGATGTTGCATTGGCACACCTTCTTGTTTATGAGACACCTTCTGCAAATGGTAGATACATTTGTGCTGAGAGTTCATTGCACCGTGGTGAACTTGTTGCTATTTTGGCCAAGTATTTCCCTGAGTACCCTATTCCTACCAAATGTTCAGATGAGAAGAACCCAAGAGTAAAACCCTACATATTTTCAAATCAAAGGCTCAAAGATTTGGGAATGGAATTCACTCCAGTGAATCTTTGTCTCTATGAAACGGTGAAGAATCTTCAGGACAATGGCCATCTTCCTCTTCCTCCAAAGCACTTCTAA 903 0.4452 MPAIAVVDASSASGQTVCVTGAGGFIASWLVKLLLEKGYTVKGTLRNPDDPKNQHLRELEGAKERLTLHKVDLLDFESVKSVFNGCHGVFHTASPVTDNPEEMVEPAVNGTKTVIMAAAEAKVRRVIFTSSIGTVYMDPKTSRDQIVDESSWSDLEYCKSTKNWYCYGKTVAEQTAWEISKEKGVDLIVVNPVLAYVHVKDVALAHLLVYETPSANGRYICAESSLHRGELVAILAKYFPEYPIPTKCSDEKNPRVKPYIFSNQRLKDLGMEFTPVNLCLYETVKNLQDNGHLPLPPKHF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30238g00033 300 FunFam Dihydroflavonol reductase 14 196 - -
Stsc30238g00033 300 Gene3D - 195 299 - -
Stsc30238g00033 300 Gene3D - 7 194 - -
Stsc30238g00033 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 286 IPR036291 -
Stsc30238g00033 300 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 15 284 - -
Stsc30238g00033 300 Pfam NAD dependent epimerase/dehydratase family 17 194 IPR001509 -
Stsc30238g00033 300 CDD FR_SDR_e 17 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30238g00033 Stsc-Chr30238 164719 168385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30238g00033 14 247 Monolignol Biosynthesis Gene Families AT1G80820 60.674 1.99e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30238g00033 K09753 - gmx:100799994 510.76