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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Stsc30238g00030
ATGTCAGGTGACGAAGCCCCAGCTGTGGTACCTGAGGCAGCAGCAGCTCCTGCCATTGGTGAGCCAATGGATATCATGACTGCCTTGCAGCTTGTGCTCAGGAAGTCACTTGCTTATGGTGGCCTTGCTCGTGGCCTTCACGAGGGTGCCAAGGTTATTGAGAAGCGCACCGCACAGCTTGTTGTTCTTGCAGAGGACTGCGACCAACCCGACTATGTTAAACTTGTCAAGGCCCTTTGTGCTGAGCACAGTGTTAGCCTTCTGACAGTTCCAAGTGCAAAGACCCTTGGAGAGTGGGCTGGTCTTTGCAAGATCGACTCAGAAGGAAAAGCTAGGAAGGTGACTGGTTGCTCCTGCGTTGTTGTTAAGGACTTTGGTGAGGAACATGAAGCCTATAATGTTGTCCTTCAGCATGTGAAAGCTCAATGA
429
0.5128
MSGDEAPAVVPEAAAAPAIGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKRTAQLVVLAEDCDQPDYVKLVKALCAEHSVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKAQ
142
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Stsc30238g00030
142
FunFam
40S ribosomal protein S12
9
142
-
-
Stsc30238g00030
142
PRINTS
Ribosomal protein S12E family signature
32
45
IPR000530
GO:0003735|GO:0005840|GO:0006412
Stsc30238g00030
142
PRINTS
Ribosomal protein S12E family signature
87
108
IPR000530
GO:0003735|GO:0005840|GO:0006412
Stsc30238g00030
142
PRINTS
Ribosomal protein S12E family signature
46
62
IPR000530
GO:0003735|GO:0005840|GO:0006412
Stsc30238g00030
142
PRINTS
Ribosomal protein S12E family signature
112
125
IPR000530
GO:0003735|GO:0005840|GO:0006412
Stsc30238g00030
142
PANTHER
40S RIBOSOMAL PROTEIN S12
16
141
-
-
Stsc30238g00030
142
SUPERFAMILY
L30e-like
22
140
IPR029064
-
Stsc30238g00030
142
Gene3D
-
10
142
IPR029064
-
Stsc30238g00030
142
Pfam
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
28
121
IPR004038
-
Stsc30238g00030
142
ProSitePatterns
Ribosomal protein S12e signature.
28
46
IPR000530
GO:0003735|GO:0005840|GO:0006412
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Stsc30238g00030
Stsc-Chr30238
139667
141358
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Stsc30238g00030
19
142
Cytoplasmic Ribosomal Protein Gene Family
AT1G15930
76.613
5.72e-67
197
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Stsc30238g00030
K02951
-
gmx:100786733
244.588
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