Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30238g00015 ATGGAAGGTCTTGAACAAATCAAATTGGAGAACATAGATCTTGCTCAAATACCATTGGAAGAAGTGTTTCAGAAATTGAATTGCACAAAGGAGGGATTGACAAGTGAAAATGCCAAGAACCGGTTGGAACTTTTTGGTCCCAACAAGTTGGAAGAAAAGAAGGCAATAAATTAA 174 0.3678 MEGLEQIKLENIDLAQIPLEEVFQKLNCTKEGLTSENAKNRLELFGPNKLEEKKAIN 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30238g00015 57 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 55 IPR023298 -
Stsc30238g00015 57 Pfam Cation transporter/ATPase, N-terminus 16 54 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30238g00015 Stsc-Chr30238 51084 51800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30238g00015 3 54 Primary Pumps ATPases AT5G57350 63.462 1.33e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30238g00015 K01535 - csin:114287798 81.6481