Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00030 ATGAAGGAACAAGGAGGAGGAGGAGGTGGTGGTGGGAGGAAGCAGGGTGCAGCATCACCATGTGCAGCATGCAAGCTTCTAAGGAGAAGGTGTGCACAAGATTGTGTATTTGCTCCCTATTTCCCAGCTGATGAACCTCACAAGTTTGCTAATGTTCATAGAGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGACCTTCCAATGGATCAAAGAAGGGATGCAGTGAGTAGCATGGTGTATGAGGCTAATGCTAGAGTCCGAGACCCTGTTTATGGTTGTGTAGGTGCAATTTCTTCTCTCCAACAACAAATTGATGTCCTACAAACCCAATTGGCCATAGCCCAAGCTGAGGTGGTCCACCTTAGGATGCGCCAACCTAATTTCCTTTCTAATGGGCTGGGCCCAAATAGCCCAACCAATAGTGGGTCCCCACCGTCCAAAGTTATGGACTCACAAGCCAAGCCTTTTTTTGACATGGACATGGTGGTAGACCAGGCCAGCTATGGTGATTCAATGTGGTCATAA 531 0.4802 MKEQGGGGGGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHRVFGASNVNKMLQDLPMDQRRDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQPNFLSNGLGPNSPTNSGSPPSKVMDSQAKPFFDMDMVVDQASYGDSMWS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00030 176 MobiDBLite consensus disorder prediction 131 150 - -
Stsc30237g00030 176 Coils Coil 99 119 - -
Stsc30237g00030 176 MobiDBLite consensus disorder prediction 131 153 - -
Stsc30237g00030 176 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Stsc30237g00030 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 140 - -
Stsc30237g00030 176 Pfam Lateral organ boundaries (LOB) domain 20 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00030 Stsc-Chr30237 200727 204543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00030 13 176 AS2 family AT1G31320 78.916 1.22e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc30237g00030 LOB 1.5e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00030 - - gmx:100794219 273.478