Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00025 ATGGCAGCTATTGCTTCTTGCCCAAGATCTGTTCTAAAGGATTCATCAACATTAATCTTGATCCAATTTCTTGGGGGAGGTCTCCAGGGTTGTGATGCATCATTGTTGCTGAACAACACAGATGCACCTACAAATAACAGCTCAATACGAGGTTTGGATGTGGTCAACCAAATCAAGACAGCAGTTGAAAGTGTTTGTCCTCAAACAGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTGAAGTATCTTCTTCATTGGGAGGTGGTCCTACATGGCCAGTTCTGCTGGGAAGAAGAGACAGCTTAACAGCAGCAAATACAACCCTAGTTAGTCAAAATCTTCCATCACCTTCCTTCACACTTGATCAACTTAAAAGTTCCTTTGCTGCTCAAGGTCTCAACACCACCGATTTAGTTGCACTCTCAGGTGCTCATACTTTTGGAAGAGCTCGTTGCAGCACATTTGTTGATCGATTATACAATTTCAGTAACTCAGGCAATCCTGATCCAACTTTGAACACAACCTACTTAGAAACTTTGAGACAAATATGCCCTCAAAATGGGACTGGTGATAATGTCACAAATTTGGACCTAACTACCCCTGATACATTTGACAACAACTATTACTCCAATCTTGGGCAACAAAATGGATTGCTTCAGAGTGATCAAGAGTTGGTTTCAACTCCTGGGGCAGATACCGTTGACCTGGTCAACACCTATAGTAGTGACCAAAATGCATTCTTTAACCAATTCGCAGCGTCAATGATCAAAATGGGCAACATTGGAGTACTAACTGGGAATCAAGGAGAGATCCGATTGCAATGTAATTCTGTGAATTAA 840 0.4167 MAAIASCPRSVLKDSSTLILIQFLGGGLQGCDASLLLNNTDAPTNNSSIRGLDVVNQIKTAVESVCPQTVSCADILALAAEVSSSLGGGPTWPVLLGRRDSLTAANTTLVSQNLPSPSFTLDQLKSSFAAQGLNTTDLVALSGAHTFGRARCSTFVDRLYNFSNSGNPDPTLNTTYLETLRQICPQNGTGDNVTNLDLTTPDTFDNNYYSNLGQQNGLLQSDQELVSTPGADTVDLVNTYSSDQNAFFNQFAASMIKMGNIGVLTGNQGEIRLQCNSVN 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00025 279 ProSiteProfiles Plant heme peroxidase family profile. 15 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PANTHER PEROXIDASE 72-RELATED 28 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 Pfam Peroxidase 24 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 FunFam Peroxidase 115 258 - -
Stsc30237g00025 279 Gene3D - 18 279 - -
Stsc30237g00025 279 CDD secretory_peroxidase 29 278 IPR033905 GO:0004601|GO:0042744
Stsc30237g00025 279 ProSitePatterns Peroxidases proximal heme-ligand signature. 137 147 IPR019793 -
Stsc30237g00025 279 Gene3D Peroxidase, domain 2 115 258 - -
Stsc30237g00025 279 SUPERFAMILY Heme-dependent peroxidases 17 279 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Haem peroxidase superfamily signature 137 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Haem peroxidase superfamily signature 88 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Haem peroxidase superfamily signature 70 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 211 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 253 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 17 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 50 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 195 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 136 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 69 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00025 279 PRINTS Plant peroxidase signature 88 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00025 Stsc-Chr30237 167706 174044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00025 16 279 Peroxidase AT5G06720 57.565 1.30e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00025 K00430 - gmx:548068 387.111