Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00024 ATGGGTTCAATAAGTGTTAATGGAGTGGTGGTGGCACTGTTGTTGTTTAGTGGAGTGGTGGTGATGAATGCTTATCAGTTGAGCATTGGGTTCTACTCAACGACATGTCCAACATTGCAAGCTGTTGTGCTCAGTGTCATATCCAATGCTTTTCTAACAGATCCTCGTATTGGTGCAAGCCTCATGAAGTTTCATTTCAATGACTGCTTTGTTCAAGGTTGTGATGCATCATTGTTGCTGAACAACACAGATGCACCTACAAATAACAGCTCAATACGAGGTTTGGATGTGGTCAACCAAATCAAGACAGCAGTTGAAAGTGTTTGTCCTCAAACAGTTTCTTGTGCTGATATTCTTGCTCTTGCTGCTGAAGTATCTTCTTCATTGGGAGGTGGTCCTACATGGCCAGTTCTGCTGGGAAGAAGAGACAGCTTAACAGCAGCAAATACAACCCTAGTTAGTCAAAATCTTCCATCACCTTCCTTCACACTTGATCAACTTAAAAGTTCCTTTGCTGCTCAAGGTCTCAACACCACCGATTTAGTTGCACTCTCAGGTGCTCATACTTTTGGAAGAGCTCGTTGCAGCACATTTGTTGATCGATTATACAATTTCAGTAACTCAGGCAATCCTGATCCAACTTTGAACACAACCTACTTAGAAACTTTGAGACAAATATGCCCTCAAAATGGGACTGGTGATAATGTCACAAATTTGGACCTAACTACCCCTGATACATTTGACAACAACTATTACTCCAATCTTGGGCAACAAAATGGATTGCTTCAGAGTGATCAAGAGTTGGTTTCAACTCCTGGGGCAGATACCGTTGACCTGGTCAACACCTATAGTAGTGACCAAAATGCATTCTTTAACCAATTCGCAGCGTCAATGATCAAAATGGGCAACATTGGAGTACTAACTGGGAATCAAGGAGAGATCCGATTGCAATGTAATTCTGTGAATTAA 969 0.4169 MGSISVNGVVVALLLFSGVVVMNAYQLSIGFYSTTCPTLQAVVLSVISNAFLTDPRIGASLMKFHFNDCFVQGCDASLLLNNTDAPTNNSSIRGLDVVNQIKTAVESVCPQTVSCADILALAAEVSSSLGGGPTWPVLLGRRDSLTAANTTLVSQNLPSPSFTLDQLKSSFAAQGLNTTDLVALSGAHTFGRARCSTFVDRLYNFSNSGNPDPTLNTTYLETLRQICPQNGTGDNVTNLDLTTPDTFDNNYYSNLGQQNGLLQSDQELVSTPGADTVDLVNTYSSDQNAFFNQFAASMIKMGNIGVLTGNQGEIRLQCNSVN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00024 322 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Stsc30237g00024 322 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Stsc30237g00024 322 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 ProSiteProfiles Plant heme peroxidase family profile. 26 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 Gene3D - 31 322 - -
Stsc30237g00024 322 PANTHER PEROXIDASE 72-RELATED 24 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00024 322 FunFam Peroxidase 158 301 - -
Stsc30237g00024 322 Gene3D Peroxidase, domain 2 158 301 - -
Stsc30237g00024 322 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00024 Stsc-Chr30237 167706 174044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00024 9 322 Peroxidase AT5G06720 56.075 6.60e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00024 K00430 - gmx:548068 445.277