Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00017 ATGAGTGTTAGAGTGTTGGTGGTAGCATTGTTGTTGTGTGCATCAATGTCCATTAATAACTCTCAACTCAGTACCACGTTCTACTCAGAGACATGTCCCCATTTGTTTTCTATTGTGTTTTTTGTCATAGCTAATGCTTCCATCACTGATCAAAGAATCGGTGCCAGCCTCCTCAGGCTTCACTTCCATGACTGCTTTGTTCAAGGTTGTGATGCATCAATTTTGCTGAACAACACAGCAACAATAGTGAGCGAACAAGATGCACTTCCAAACATAAACTCAATAAGGGGTTTGGATGTTGTCAACAAAATCAAGACAGCAGTTGAAGCTGATTGTCCCAACACTGTTTCTTGTGCTGATATTCTTGCTCTTGCAGCTCAAATCTCTGTTTCTCTGGGAGGTGGGCCCCAATGGTCAGTTCCATTGGGAAGAAGAGACAGCTTAACAGCCAACCAAACCCTTGCTAATCTAAACCTTCCGCCGCCATTCGCCACACTTCCTCAGCTTAAAGATTTCTTTTCTCGCCAGGGTCTCGACACTACTGATTTAGTTGCACTCTCCGGTGCTCATACAATTGGAAGGGCTCACTGCCGCAATTTCGTGAACCGATTATACAATTTCAACAACACAGGCAATCCTGATCCAACATTGAACACAAGTTACTTACAAACATTGCGAACAATATGTCCCCAAGATGGAAGTGGTGATAATAACCTAACCAACTTGGATGTTACAACCCCAAATAAATTTGACAACAAATATTACTCCAATCTTGTGTCTCAAGAAGGATTGTTTCAGAGCGATCAAGAGCTTTATTCAACTCCTGGGGCAGATACCATTACCCTTGTCAACACCTATAGCAATGACATGCATGCATTCTTTGACCAATTCACAGACTCAATCATCAAAATGGGTAATATTAGTGTGCTAACTGGAAATCAAGGAGAGATCCGCTCTCAATGTAACTTTGTTAATAATGGCCCATAA 987 0.4184 MSVRVLVVALLLCASMSINNSQLSTTFYSETCPHLFSIVFFVIANASITDQRIGASLLRLHFHDCFVQGCDASILLNNTATIVSEQDALPNINSIRGLDVVNKIKTAVEADCPNTVSCADILALAAQISVSLGGGPQWSVPLGRRDSLTANQTLANLNLPPPFATLPQLKDFFSRQGLDTTDLVALSGAHTIGRAHCRNFVNRLYNFNNTGNPDPTLNTSYLQTLRTICPQDGSGDNNLTNLDVTTPNKFDNKYYSNLVSQEGLFQSDQELYSTPGADTITLVNTYSNDMHAFFDQFTDSIIKMGNISVLTGNQGEIRSQCNFVNNGP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00017 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Stsc30237g00017 328 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PANTHER PEROXIDASE 72-RELATED 20 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 FunFam Peroxidase 160 304 - -
Stsc30237g00017 328 FunFam Peroxidase 26 167 - -
Stsc30237g00017 328 SUPERFAMILY Heme-dependent peroxidases 22 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 Gene3D Peroxidase, domain 2 160 304 - -
Stsc30237g00017 328 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 Gene3D - 27 325 - -
Stsc30237g00017 328 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Stsc30237g00017 328 CDD secretory_peroxidase 22 324 IPR033905 GO:0004601|GO:0042744
Stsc30237g00017 328 ProSiteProfiles Plant heme peroxidase family profile. 22 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00017 328 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00017 Stsc-Chr30237 117307 120050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00017 5 325 Peroxidase AT2G38380 58.075 9.35e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00017 K00430 - gmx:548068 448.743