Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00013 ATGAAGAGTTTTGTTGTTAGTAGTAGTTTCATGATAAAAGTGGTAACTGTATGGTATGGTGTGTTTATGTTTGGAGTGTTACTACCCTTATCCTCAGAAGCACAGCTTGATCCATCTTTTTACAGTAAAACATGTCCGAATGTTCATTCAATTGTACGTGAAGTCATAAACAATGTCTCCAAAACAGATCCACGCATGCTTGCTAGCCTCCTCAGGCTTCACTTCCATGACTGTTTTGTTCAAGGTTGTGATGGATCACTTTTACTGAACAACACTGCAACAATAGTAAGCGAACAACAAGCTCGGCCAAATAACAATTCAATAAGAGGTTTGAATGTTGTGAATCAGATCAAAACCGCAGTGGAAAATGCTTGCCCTGGCATAGTTTCCTGTGCTGATATCCTTGCTCTTGGAGCTGAAATATCTACTGTTCTGGCTGGAGGTCCGGATTGGAAAGTTGAATTAGGAAGAAGAGATAGTTTAACAGCAAATATAACATTAGCACAAAACCTTCCAGGCCCTTCCTTGACCTTGGATCAACTTAAAAAGCGCTTTTCTGATCAGGGCCTCAACACTACTGATCTTGTTGCACTCTCAGGTGCACATACATTTGGTAGAGCTCGATGTGTTTTATTCGTGGGACGGCTATACAACTTTAGCAACACGGGTAACCCTGATCCGACTCTTAATGCGACTTATCTACAAACGTTGAGATCGGTGTGCCCGAATGGCGGCCCGGGAGCCAACGTAGCGGATTTGGACCTTACAACACCAGACACGTTCGACAAAAACTATTACTCGAATCTTCAGGTTCAGAAGGGCTTGCTCCAGAGTGACCAAGAGTTGTTCTCAACTTCGGGTGCAGATACCATTAGCATTGTTAACAAGTTCAGTGCTGACCAAAATGCTTTCTTTGAAGCCTTCAAGGCTTCAATGATCAAAATGGGTCAAATTGGTGTGTTGACTGGTTCTAAAGGCGAAATTAGAAAACAATGTAACTTTATTAACTCACAATCTGCTGAACTGGGTCTCTACAATGTGGCTTCTAAAGAATCATCGGAAGAAGATGGAGGAATGGTTAGCTCAATCTAA 1092 0.4194 MKSFVVSSSFMIKVVTVWYGVFMFGVLLPLSSEAQLDPSFYSKTCPNVHSIVREVINNVSKTDPRMLASLLRLHFHDCFVQGCDGSLLLNNTATIVSEQQARPNNNSIRGLNVVNQIKTAVENACPGIVSCADILALGAEISTVLAGGPDWKVELGRRDSLTANITLAQNLPGPSLTLDQLKKRFSDQGLNTTDLVALSGAHTFGRARCVLFVGRLYNFSNTGNPDPTLNATYLQTLRSVCPNGGPGANVADLDLTTPDTFDKNYYSNLQVQKGLLQSDQELFSTSGADTISIVNKFSADQNAFFEAFKASMIKMGQIGVLTGSKGEIRKQCNFINSQSAELGLYNVASKESSEEDGGMVSSI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00013 363 ProSiteProfiles Plant heme peroxidase family profile. 35 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 Gene3D - 40 336 - -
Stsc30237g00013 363 Gene3D Peroxidase, domain 2 172 315 - -
Stsc30237g00013 363 SUPERFAMILY Heme-dependent peroxidases 35 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 Pfam Peroxidase 52 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 FunFam Peroxidase 172 315 - -
Stsc30237g00013 363 PANTHER PEROXIDASE 72-RELATED 33 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00013 363 CDD secretory_peroxidase 35 335 IPR033905 GO:0004601|GO:0042744
Stsc30237g00013 363 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Stsc30237g00013 363 FunFam Peroxidase 39 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00013 Stsc-Chr30237 101433 103996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00013 10 336 Peroxidase AT5G06720 57.317 1.69e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00013 K00430 - gmx:112997600 524.242