Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00011 ATGAGTGGTGGTTTGTTGTTGTTTGTGGTTGGAATAGTAGTTAATGCACAACTTGATCCCTCATTCTACAACACTACATGTCCCAATGTCCATTCAATTGTGAGTAATGTGCTCACAAATGTTTCACAATCTGATCCAAGAATCCTTGCCAGCCTCATCAGGCTCCACTTTCATGACTGCTTTGTTCAAGGCTGTGATGGATCAATTTTATTGAATGACACAAGTAGCATAGTGAGTGAGCAAAGTGCAGGACCAAATAACAACTCAATAAGAGGTTTAGACGTTGTGAATCAGATCAAAACAGCTGTGGAAAACGCATGTCCTAGCGTTGTTTCTTGTGCTGACATTCTTGCCCTTGCAGCAGAAGTGTCTTCTGAGCTGGCAAATGGTCCTAGCTGGCAAGTTCCATTAGGAAGAAGGGACAGTGTAACTGCAAACCAAACACTTGCTAATCAAAATCTTCCAGCTCCTACCTTCAACCTCTCTCTACTTATTTCCAGATTTGCTAATCAAAATCTCAACATTACTGACCTTGTTGCACTTTCAGGTGCTCACACAATTGGAAGAGCTCAATGCAAATCTTTCAGCAGTAGATTATACAATTTCAGCAGCAGTGGGAACCCTGACCCAACTTTGAACACAACCTACCTACAAACACTTAGATCAATTTGCCCCAATGGTGGGCCAGGGACTAATCTCACCAATTTGGACCTAACAACCCCTGATACATTTGATAACAAGTATTACTCCAATCTTCAGCAGCAAAATGGGTTGCTTCAGAGTGATCAAGAGTTGTGGAACACAACAGGTGCCTCCACAATTAGCATTGTCAACAGTTTTAGTAGCAACCAGAGTCTCTTCTTTGAGGCATTTAAGGCTTCAATGATTAAGATGGGTAACATTGGAGTTCTAACTGGCTCTCAAGGTGAAATCAGAACACAGTGTAATTTTGTTAATGGCAACTCCTCTGGATTGGCTACTATGGTCACTAAAGAATCATTGCAAGATAATGAAAGGGTTAGCTCAATCTGA 1032 0.4138 MSGGLLLFVVGIVVNAQLDPSFYNTTCPNVHSIVSNVLTNVSQSDPRILASLIRLHFHDCFVQGCDGSILLNDTSSIVSEQSAGPNNNSIRGLDVVNQIKTAVENACPSVVSCADILALAAEVSSELANGPSWQVPLGRRDSVTANQTLANQNLPAPTFNLSLLISRFANQNLNITDLVALSGAHTIGRAQCKSFSSRLYNFSSSGNPDPTLNTTYLQTLRSICPNGGPGTNLTNLDLTTPDTFDNKYYSNLQQQNGLLQSDQELWNTTGASTISIVNSFSSNQSLFFEAFKASMIKMGNIGVLTGSQGEIRTQCNFVNGNSSGLATMVTKESLQDNERVSSI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00011 343 FunFam Peroxidase 21 161 - -
Stsc30237g00011 343 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 FunFam Peroxidase 155 298 - -
Stsc30237g00011 343 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Stsc30237g00011 343 Pfam Peroxidase 36 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 SUPERFAMILY Heme-dependent peroxidases 17 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 Gene3D - 22 319 - -
Stsc30237g00011 343 PANTHER PEROXIDASE 72-RELATED 11 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00011 343 CDD secretory_peroxidase 17 318 IPR033905 GO:0004601|GO:0042744
Stsc30237g00011 343 Gene3D Peroxidase, domain 2 155 298 - -
Stsc30237g00011 343 ProSiteProfiles Plant heme peroxidase family profile. 17 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00011 Stsc-Chr30237 81878 83740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00011 7 320 Peroxidase AT5G06720 60.681 2.07e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00011 K00430 - gmx:100814455 479.174