Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00009 ATGGTAGCTCTATGCTGCCTAGTACTCACGTCTAGGTTTCGAGTTAATGCTCAACTTAGTCCCGATTATTATAGTACGACATGCCCTAATCTTCGTGCAATTGTGCGTCGAGTGATAGTAAACGCAGCACAATCTAATCCGCGCATTTTCGCGAGTCTTCTCAGGCTTCACTTTCATGATTGTTTTGTTCTTGGATGTGATGCATCAATTCTTTTGGATGCTACTCCAAACATGGAGAGCGAACAAGACGCACTTGCAAATAAAAATTCGATAAGAGGGTTGAATGTGATTAGCCAGATCAAGACAGAGGTGGAAAAAGCTTGTCCTAAAACGGTTTCTTGTGCTGATATTCTTGCTCTTTCCGCACAAATTTCTACTACTCAGTCAGGAGGTCCATTTTGGAATGTTACACTTGGAAGATTGGATGGTCTTGTAGCAAACCAAAGCCGTGCTAATCAAAATCTTCCTGGTTTTTTCTTCACCCTCCCTCAACTCAAAGCAACTTTCAGTCGCCATGGCCTCAACGCAACCGATTTAGTTGCACTCTCAGGTGCTCATACATTTGGTAGAGGCCATTGTTCACAAATTCGAGGCCGGTTATATAACTTTAGAAACACAGGAAAACCCGATCCAAGTCTTAACACAACTTATTTAACAACATTGAGAACAATATGCCCTAATGATAAGAGCAACCCTGGTAACATCATCAATTTGGACGTATCGACCCTAATAGATTCGACAACAAATACTTCTCGAATCTTAAAGTTCACAAAGGATTGTTTCGAAGTGATCAAGAGTTGTTCTCAACAACCAGTGCAGACACCATTATTAGCACTGTGA 840 0.4131 MVALCCLVLTSRFRVNAQLSPDYYSTTCPNLRAIVRRVIVNAAQSNPRIFASLLRLHFHDCFVLGCDASILLDATPNMESEQDALANKNSIRGLNVISQIKTEVEKACPKTVSCADILALSAQISTTQSGGPFWNVTLGRLDGLVANQSRANQNLPGFFFTLPQLKATFSRHGLNATDLVALSGAHTFGRGHCSQIRGRLYNFRNTGKPDPSLNTTYLTTLRTICPNDKSNPGNIINLDVSTLIDSTTNTSRILKFTKDCFEVIKSCSQQPVQTPLLAL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00009 279 Gene3D - 22 155 - -
Stsc30237g00009 279 ProSiteProfiles Plant heme peroxidase family profile. 18 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 CDD secretory_peroxidase 18 242 IPR033905 GO:0004601|GO:0042744
Stsc30237g00009 279 Gene3D Peroxidase, domain 2 156 242 - -
Stsc30237g00009 279 FunFam Peroxidase 22 164 - -
Stsc30237g00009 279 SUPERFAMILY Heme-dependent peroxidases 18 243 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Stsc30237g00009 279 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PANTHER PEROXIDASE 72-RELATED 16 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 Pfam Peroxidase 36 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00009 279 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00009 Stsc-Chr30237 64717 71750 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00009 1 242 Peroxidase AT3G49110 56.790 5.04e-90 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00009 K00430 - vra:106774868 296.204