Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30237g00008 ATGAGGCACAGCTTTGATCCCTCGTTTTACAATGAAACATGTCCGAATGTGCATTCAATTGTGACTCAAGTCATAGTCAATGCTTCACAGAGTGATCCTCGCATTTTTGCTAGCCTCCTCAGGCTTCACTTTCATGATTGTTTTGTTCTTGGGTGTGAGGCATCAGTGTTGTTAACCTTAAACGGCACAGATAGTGAGCAACAAGCTGGTCCAAATATTAACTCAATAAGAGGTTTGGATGTTGTGAATCAAATCAAAACAGCCGTTGAAAATGCTTGTCCTGGAGTTGTTTCTTGTGCTGATATTCTTGCCCTTGCAGCTCAAATTTCTACTACTCAGTCTGGTGGTCCTTCTTGGAACGTTTCACTGGGAAGAAGGGATGGATTAAATGCAAGCCAAAGCCTCGCAAATTCAAACCTCCCAGCATTTAACTTCGATCTCACTAAACTTCAATCAGCTTTTGCTGCTCAAGGCCTCAACACGACTGACTTAGTTGTACTCGCTGCTCAATTTCGTGACCGTTTGTACAATTTCAACGGCACCGGCAACCCTGATCCAACTCTCAACACAACTTACTTGGGAACACTCGAATTAATTTGCCCCAACAACACTAACGATAATAACATCACGAATTTGGACCCAACAACTCCTGACAATTTCGATAACAATTACTACATAAATCTTCAAAACCAAGAGGGTTTGTTTCAAAGCGACCAAGTCCTGTTCTCAACGCCGAACGCTACCGACACTGTTAGCGTTGTGAACGGGTTTGCTAATGATCAGAACTCTTTCTTTCAAGCCTTCGTGAATTCTATGATCAAAATGGGTAACATTGATGTCATAACAGGGACTCAAGGTGAAATTAGAAACCAATGCAATGTTGTGAATAATGCATCTTCTTCTGTTGGTATAGCCAGTGTGATCTCCCAAGAACAAGAACAAAAATCTTCTCATCAAGAGAATCTTGTTAGCTCGATTTAA 981 0.4139 MRHSFDPSFYNETCPNVHSIVTQVIVNASQSDPRIFASLLRLHFHDCFVLGCEASVLLTLNGTDSEQQAGPNINSIRGLDVVNQIKTAVENACPGVVSCADILALAAQISTTQSGGPSWNVSLGRRDGLNASQSLANSNLPAFNFDLTKLQSAFAAQGLNTTDLVVLAAQFRDRLYNFNGTGNPDPTLNTTYLGTLELICPNNTNDNNITNLDPTTPDNFDNNYYINLQNQEGLFQSDQVLFSTPNATDTVSVVNGFANDQNSFFQAFVNSMIKMGNIDVITGTQGEIRNQCNVVNNASSSVGIASVISQEQEQKSSHQENLVSSI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30237g00008 326 Pfam Peroxidase 23 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 270 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 14 33 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 96 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 115 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 38 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 227 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 77 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Plant peroxidase signature 211 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PANTHER PEROXIDASE 72-RELATED 6 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 SUPERFAMILY Heme-dependent peroxidases 6 296 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 FunFam Peroxidase 8 153 - -
Stsc30237g00008 326 Gene3D - 9 296 - -
Stsc30237g00008 326 PRINTS Haem peroxidase superfamily signature 36 50 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Haem peroxidase superfamily signature 213 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Haem peroxidase superfamily signature 115 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 PRINTS Haem peroxidase superfamily signature 97 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 FunFam Peroxidase 141 275 - -
Stsc30237g00008 326 ProSiteProfiles Plant heme peroxidase family profile. 4 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30237g00008 326 CDD secretory_peroxidase 6 295 IPR033905 GO:0004601|GO:0042744
Stsc30237g00008 326 Gene3D Peroxidase, domain 2 141 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30237g00008 Stsc-Chr30237 56872 60162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30237g00008 5 298 Peroxidase AT5G06720 55.082 5.00e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30237g00008 K00430 - gmx:112997600 386.341